PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 3AG1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3AG1_PGV_C_267 | 74% | 45% | 0.141 | 0.972 | 0.9 | 1.2 | 2 | 5 | 4 | 0 | 100% | 1 |
| 3AG1_PGV_A_521 | 69% | 35% | 0.151 | 0.966 | 0.82 | 1.73 | 2 | 7 | 1 | 0 | 100% | 1 |
| 3AG1_PGV_N_1266 | 69% | 42% | 0.15 | 0.964 | 0.85 | 1.37 | 3 | 5 | 1 | 0 | 100% | 1 |
| 3AG1_PGV_P_1267 | 57% | 47% | 0.187 | 0.962 | 1.02 | 1.01 | 2 | 3 | 5 | 0 | 100% | 1 |
| 3AG1_PGV_A_524 | 10% | 31% | 0.274 | 0.778 | 1.33 | 1.4 | 3 | 8 | 5 | 0 | 100% | 1 |
| 3AG1_PGV_N_1524 | 3% | 37% | 0.392 | 0.73 | 1.26 | 1.21 | 2 | 6 | 1 | 0 | 100% | 1 |
| 3AG1_PGV_P_1268 | 1% | 25% | 0.575 | 0.733 | 1.43 | 1.6 | 2 | 8 | 1 | 0 | 100% | 1 |
| 3AG1_PGV_C_268 | 0% | 23% | 0.662 | 0.644 | 1.47 | 1.7 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |
