3VD4
DMS: DIMETHYL SULFOXIDE
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3VD4_DMS_C_8018 | 85% | 24% | 0.102 | 0.968 | 2.65 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8008 | 81% | 24% | 0.121 | 0.973 | 2.67 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8016 | 78% | 23% | 0.129 | 0.971 | 2.66 | 0.58 | 1 | - | 2 | 0 | 100% | 1 |
3VD4_DMS_D_8011 | 75% | 24% | 0.142 | 0.976 | 2.64 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8005 | 75% | 26% | 0.151 | 0.985 | 2.6 | 0.46 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8003 | 71% | 33% | 0.154 | 0.976 | 2.31 | 0.42 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8006 | 67% | 25% | 0.126 | 0.935 | 2.66 | 0.45 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8008 | 67% | 24% | 0.149 | 0.958 | 2.68 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8001 | 67% | 33% | 0.171 | 0.98 | 2.22 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8009 | 62% | 39% | 0.178 | 0.971 | 2.23 | 0.21 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8010 | 62% | 23% | 0.179 | 0.971 | 2.64 | 0.61 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8010 | 59% | 26% | 0.173 | 0.955 | 2.6 | 0.46 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8004 | 58% | 24% | 0.15 | 0.929 | 2.63 | 0.56 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8003 | 56% | 23% | 0.165 | 0.939 | 2.59 | 0.63 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8001 | 51% | 18% | 0.195 | 0.951 | 2.63 | 0.96 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8011 | 51% | 25% | 0.2 | 0.955 | 2.63 | 0.47 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8015 | 49% | 23% | 0.164 | 0.909 | 2.63 | 0.63 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8015 | 48% | 25% | 0.201 | 0.947 | 2.64 | 0.49 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8004 | 48% | 29% | 0.197 | 0.942 | 2.6 | 0.32 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8003 | 47% | 25% | 0.177 | 0.918 | 2.59 | 0.55 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_C_8005 | 47% | 25% | 0.193 | 0.934 | 2.62 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8006 | 47% | 26% | 0.161 | 0.899 | 2.65 | 0.42 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8017 | 46% | 22% | 0.177 | 0.912 | 2.7 | 0.6 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8013 | 45% | 24% | 0.19 | 0.922 | 2.63 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8001 | 42% | 20% | 0.219 | 0.941 | 2.58 | 0.88 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_C_8004 | 42% | 31% | 0.213 | 0.932 | 2.55 | 0.27 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_A_8006 | 41% | 25% | 0.182 | 0.896 | 2.63 | 0.47 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8001 | 41% | 18% | 0.227 | 0.942 | 2.65 | 0.92 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8006 | 39% | 22% | 0.182 | 0.89 | 2.65 | 0.63 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_D_8005 | 39% | 29% | 0.232 | 0.94 | 2.55 | 0.34 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8017 | 39% | 24% | 0.187 | 0.893 | 2.65 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8014 | 38% | 24% | 0.198 | 0.902 | 2.65 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8005 | 37% | 22% | 0.197 | 0.896 | 2.67 | 0.65 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8019 | 37% | 24% | 0.161 | 0.858 | 2.68 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8007 | 36% | 23% | 0.222 | 0.917 | 2.64 | 0.61 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8010 | 35% | 26% | 0.225 | 0.916 | 2.59 | 0.45 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8014 | 35% | 31% | 0.229 | 0.918 | 2.57 | 0.22 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8010 | 34% | 27% | 0.245 | 0.929 | 2.6 | 0.38 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8008 | 33% | 24% | 0.228 | 0.91 | 2.64 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8009 | 33% | 24% | 0.222 | 0.899 | 2.63 | 0.56 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8004 | 32% | 25% | 0.208 | 0.883 | 2.61 | 0.53 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8014 | 32% | 24% | 0.208 | 0.881 | 2.65 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8007 | 31% | 22% | 0.255 | 0.927 | 2.66 | 0.63 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8016 | 31% | 23% | 0.222 | 0.89 | 2.65 | 0.58 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8015 | 30% | 24% | 0.231 | 0.893 | 2.66 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8007 | 27% | 23% | 0.236 | 0.886 | 2.63 | 0.62 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8008 | 27% | 22% | 0.239 | 0.885 | 2.63 | 0.65 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8002 | 27% | 28% | 0.257 | 0.903 | 2.52 | 0.44 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_B_8007 | 24% | 20% | 0.238 | 0.867 | 2.67 | 0.75 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8002 | 24% | 29% | 0.245 | 0.873 | 2.53 | 0.37 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_C_8013 | 23% | 25% | 0.266 | 0.889 | 2.59 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8003 | 20% | 25% | 0.252 | 0.858 | 2.6 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8015 | 20% | 23% | 0.227 | 0.83 | 2.62 | 0.64 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8002 | 20% | 28% | 0.275 | 0.876 | 2.54 | 0.41 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_B_8002 | 18% | 21% | 0.313 | 0.905 | 2.57 | 0.81 | 1 | - | 1 | 0 | 100% | 1 |
3VD4_DMS_C_8017 | 18% | 24% | 0.278 | 0.863 | 2.63 | 0.52 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8011 | 17% | 22% | 0.31 | 0.89 | 2.6 | 0.68 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8016 | 17% | 23% | 0.291 | 0.869 | 2.68 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8012 | 13% | 25% | 0.29 | 0.833 | 2.61 | 0.5 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_B_8011 | 13% | 21% | 0.27 | 0.81 | 2.68 | 0.66 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8012 | 12% | 24% | 0.261 | 0.792 | 2.68 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8013 | 10% | 22% | 0.247 | 0.75 | 2.67 | 0.61 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8014 | 9% | 22% | 0.271 | 0.763 | 2.7 | 0.59 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8012 | 9% | 23% | 0.346 | 0.839 | 2.67 | 0.57 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8009 | 6% | 23% | 0.35 | 0.776 | 2.65 | 0.6 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_A_8013 | 4% | 23% | 0.342 | 0.735 | 2.69 | 0.54 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_D_8009 | 3% | 24% | 0.391 | 0.716 | 2.64 | 0.51 | 1 | - | 0 | 0 | 100% | 1 |
3VD4_DMS_C_8012 | 2% | 24% | 0.391 | 0.699 | 2.65 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
1JYN_DMS_C_8401 | 100% | 79% | 0.039 | 0.995 | 0.61 | 0.27 | - | - | 0 | 0 | 100% | 1 |
1JZ8_DMS_D_8401 | 100% | 57% | 0.038 | 0.993 | 1.24 | 0.43 | - | - | 0 | 0 | 100% | 1 |
1JYW_DMS_C_8401 | 100% | 75% | 0.042 | 0.994 | 0.78 | 0.23 | - | - | 0 | 0 | 100% | 1 |
1JZ7_DMS_B_8411 | 100% | 69% | 0.045 | 0.993 | 0.52 | 0.68 | - | - | 0 | 0 | 100% | 1 |
3DYP_DMS_C_8401 | 100% | 72% | 0.048 | 0.996 | 0.96 | 0.15 | - | - | 0 | 0 | 100% | 1 |
7P7D_DMS_A_906 | 100% | 86% | 0.042 | 0.993 | 0.36 | 0.37 | - | - | 0 | 0 | 100% | 1 |
7GBT_DMS_A_1002 | 100% | 86% | 0.044 | 0.993 | 0.51 | 0.22 | - | - | 0 | 0 | 100% | 1 |
7GEM_DMS_A_401 | 100% | 84% | 0.043 | 0.991 | 0.56 | 0.22 | - | - | 0 | 0 | 100% | 1 |