Ligand validation:4D9B

PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

PMP is a Ligand Of Interest in 4D9B designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4D9B_PMP_B_401	95%	7%	0.078	0.982	2.15	2.64	5	10	0	0	100%	1
4D9B_PMP_A_402	95%	23%	0.082	0.984	0.97	2.15	1	5	0	0	100%	1
4D9B_PMP_D_402	93%	40%	0.092	0.989	1.13	1.2	1	2	0	0	100%	1
4D9B_PMP_C_402	88%	6%	0.096	0.973	2.06	2.91	4	9	0	0	100%	1
4D9C_PMP_D_402	92%	37%	0.088	0.979	1.18	1.28	1	4	1	0	100%	1
2QB3_PMP_A_700	99%	24%	0.05	0.985	2.08	1.04	4	-	0	0	100%	0.4
4E3Q_PMP_B_503	99%	23%	0.048	0.982	1.44	1.75	1	6	0	0	100%	1
8TN3_PMP_B_501	99%	52%	0.058	0.99	0.87	0.99	-	1	0	0	100%	1
8PNX_PMP_A_301	99%	55%	0.053	0.984	0.56	1.16	-	2	0	0	100%	1
6HBV_PMP_A_502	99%	16%	0.061	0.992	2.55	1.19	3	2	0	0	100%	0.5

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.