DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4IL6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4IL6_DGD_C_517 | 74% | 55% | 0.103 | 0.945 | 0.86 | 0.88 | 2 | 2 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_C_515 | 70% | 55% | 0.109 | 0.937 | 0.87 | 0.88 | 2 | 3 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_C_516 | 67% | 52% | 0.105 | 0.922 | 0.92 | 0.94 | 3 | 4 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_H_102 | 66% | 56% | 0.111 | 0.926 | 0.88 | 0.83 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_c_515 | 65% | 54% | 0.119 | 0.932 | 0.89 | 0.9 | 3 | 2 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_c_517 | 62% | 56% | 0.118 | 0.921 | 0.89 | 0.82 | 2 | 3 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_h_102 | 61% | 55% | 0.107 | 0.907 | 0.92 | 0.84 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
4IL6_DGD_c_516 | 55% | 53% | 0.119 | 0.897 | 0.92 | 0.91 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
5B5E_DGD_c_919 | 87% | 44% | 0.076 | 0.957 | 0.94 | 1.23 | 3 | 10 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |