PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 4YSN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4YSN_PLP_B_1001 | 98% | 14% | 0.063 | 0.985 | 1.93 | 1.92 | 4 | 6 | 1 | 0 | 100% | 0.9375 |
4YSN_PLP_A_1001 | 97% | 8% | 0.073 | 0.988 | 2.61 | 2.04 | 5 | 5 | 0 | 0 | 100% | 0.9375 |
4YSN_PLP_C_1001 | 96% | 16% | 0.077 | 0.987 | 2.09 | 1.63 | 6 | 7 | 1 | 0 | 100% | 0.9375 |
4YSN_PLP_D_1001 | 96% | 16% | 0.077 | 0.985 | 2.45 | 1.26 | 6 | 2 | 1 | 0 | 100% | 0.9375 |
5LL3_PLP_D_1000 | 96% | 9% | 0.067 | 0.976 | 2.94 | 1.55 | 3 | 4 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |