5A03
XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 5A03 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5A03_XYP_C_1342 | 85% | 59% | 0.076 | 0.941 | 0.68 | 0.89 | - | 1 | 0 | 0 | 100% | 1 |
5A03_XYP_E_1342 | 80% | 57% | 0.092 | 0.941 | 0.66 | 1 | - | 1 | 1 | 0 | 100% | 1 |
5A03_XYP_A_1342 | 76% | 62% | 0.096 | 0.933 | 0.66 | 0.78 | - | - | 0 | 0 | 100% | 1 |
5A03_XYP_A_1341 | 75% | 57% | 0.096 | 0.928 | 0.5 | 1.15 | - | 1 | 0 | 0 | 100% | 1 |
5A03_XYP_D_1341 | 59% | 53% | 0.115 | 0.897 | 0.7 | 1.12 | - | 1 | 1 | 0 | 100% | 1 |
5A03_XYP_B_1341 | 58% | 48% | 0.106 | 0.882 | 0.66 | 1.32 | - | 1 | 1 | 0 | 100% | 1 |
5A03_XYP_F_1341 | 44% | 50% | 0.133 | 0.859 | 0.67 | 1.24 | - | 1 | 1 | 0 | 100% | 1 |
5A03_XYP_E_1341 | 27% | 45% | 0.23 | 0.879 | 0.92 | 1.21 | - | 1 | 0 | 0 | 100% | 1 |
5A03_XYP_A_1344 | 20% | 62% | 0.19 | 0.793 | 0.71 | 0.76 | - | - | 0 | 0 | 100% | 1 |
5A03_XYP_D_1342 | 20% | 54% | 0.249 | 0.852 | 0.65 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
5A03_XYP_E_1343 | 17% | 32% | 0.205 | 0.784 | 0.88 | 1.79 | - | 2 | 1 | 0 | 100% | 1 |
5A03_XYP_C_1341 | 13% | 47% | 0.285 | 0.826 | 0.61 | 1.42 | - | 1 | 0 | 0 | 100% | 1 |
5A03_XYP_A_1343 | 5% | 56% | 0.32 | 0.715 | 0.74 | 0.97 | - | 1 | 2 | 0 | 100% | 1 |
1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
8Y00_XYP_D_201 | 99% | 28% | 0.032 | 0.986 | 0.63 | 2.19 | - | 7 | 1 | 0 | 90% | 0.9 |
2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |