YGP: 5'-O-[(R)-[(3,6-dimethyl-2-oxo-1,2-dihydropyridin-4-yl)oxy](hydroxy)phosphoryl]guanosine
YGP is a Ligand Of Interest in 5D4V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5D4V_YGP_C_308 | 48% | 5% | 0.167 | 0.909 | 3.45 | 2.02 | 15 | 10 | 2 | 0 | 100% | 1 |
| 5D4V_YGP_B_307 | 42% | 4% | 0.173 | 0.891 | 3.4 | 2.42 | 13 | 12 | 4 | 0 | 100% | 1 |
| 3WB2_YGP_A_201 | 86% | 9% | 0.118 | 0.986 | 2.34 | 2.19 | 9 | 12 | 0 | 0 | 100% | 1 |
