5JI2 | pdb_00005ji2


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 5JI2 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JI2_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JI2_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5JI2_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5JI2_ADP_F_501 34% 38% 0.262 0.9480.94 1.46 1 400100%1
5JI2_ADP_E_501 30% 38% 0.288 0.9530.98 1.45 1 420100%1
6PXI_ADP_F_501 51% 38% 0.208 0.9640.95 1.46 1 430100%1
6PXL_ADP_C_501 48% 37% 0.188 0.9330.94 1.53 1 430100%1
1HT1_ADP_I_3450 44% 32% 0.234 0.9621.51 1.2 5 440100%1
1HT2_ADP_G_2450 40% 27% 0.243 0.9571.65 1.28 6 520100%1
6PXK_ADP_H_501 35% 37% 0.236 0.9270.94 1.5 1 420100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1