AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 5KQ5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5KQ5_AMP_C_401 | 10% | 56% | 0.309 | 0.817 | 0.57 | 1.12 | - | 2 | 0 | 0 | 100% | 1 |
5KQ5_AMP_C_402 | 4% | 51% | 0.314 | 0.675 | 0.66 | 1.22 | - | 3 | 2 | 0 | 100% | 1 |
4EAI_AMP_C_401 | 92% | 44% | 0.085 | 0.975 | 0.88 | 1.26 | - | 2 | 0 | 0 | 100% | 1 |
5ISO_AMP_F_403 | 91% | 44% | 0.099 | 0.985 | 0.91 | 1.26 | 1 | 4 | 0 | 0 | 100% | 1 |
2V8Q_AMP_E_1327 | 91% | 35% | 0.092 | 0.977 | 1.04 | 1.51 | 1 | 3 | 1 | 0 | 100% | 1 |
2Y8Q_AMP_E_1328 | 89% | 37% | 0.097 | 0.975 | 0.9 | 1.54 | 1 | 2 | 0 | 0 | 100% | 1 |
2YA3_AMP_E_1327 | 85% | 38% | 0.113 | 0.98 | 1.02 | 1.38 | 1 | 4 | 0 | 0 | 100% | 1 |
7SNB_AMP_A_303 | 100% | 55% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.783 |
3CLT_AMP_C_1262 | 100% | 40% | 0.046 | 0.987 | 0.91 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
3CLR_AMP_C_1262 | 100% | 41% | 0.048 | 0.989 | 1.01 | 1.29 | 1 | 3 | 0 | 0 | 100% | 1 |
5K99_AMP_D_101 | 99% | 36% | 0.05 | 0.988 | 1.13 | 1.4 | 2 | 1 | 0 | 0 | 100% | 0.9278 |
5NRH_AMP_B_700 | 99% | 34% | 0.051 | 0.989 | 1.23 | 1.39 | 3 | 2 | 0 | 0 | 100% | 1 |