UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 5MQJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5MQJ_UMP_D_302 | 56% | 25% | 0.201 | 0.976 | 1.39 | 1.66 | 3 | 8 | 1 | 0 | 100% | 1 |
5MQJ_UMP_C_302 | 53% | 27% | 0.215 | 0.977 | 1.19 | 1.76 | 1 | 8 | 0 | 0 | 100% | 1 |
5MQJ_UMP_A_302 | 52% | 24% | 0.217 | 0.976 | 1.53 | 1.6 | 7 | 6 | 0 | 0 | 100% | 1 |
5MQJ_UMP_B_302 | 49% | 28% | 0.202 | 0.949 | 1.2 | 1.68 | 1 | 8 | 2 | 0 | 100% | 1 |
3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |