DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5WS5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5WS5_DGD_c_519 | 18% | 50% | 0.26 | 0.861 | 0.85 | 1.06 | 3 | 6 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_C_519 | 10% | 52% | 0.269 | 0.78 | 0.82 | 1.04 | 3 | 6 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_c_518 | 5% | 52% | 0.341 | 0.755 | 0.89 | 0.97 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_C_517 | 4% | 46% | 0.374 | 0.775 | 0.83 | 1.23 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_c_517 | 4% | 49% | 0.367 | 0.74 | 0.82 | 1.14 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_C_518 | 2% | 52% | 0.34 | 0.652 | 0.85 | 1.02 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_H_102 | 1% | 53% | 0.508 | 0.622 | 0.82 | 1 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
5WS5_DGD_h_102 | 0% | 53% | 0.493 | 0.535 | 0.84 | 0.98 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |