AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 5YFV designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5YFV_AMP_B_402 | 69% | 31% | 0.157 | 0.972 | 1.23 | 1.5 | 2 | 5 | 0 | 0 | 100% | 1 |
5YFV_AMP_C_402 | 61% | 26% | 0.17 | 0.961 | 1.12 | 1.83 | 1 | 7 | 0 | 0 | 100% | 1 |
5YFV_AMP_A_402 | 50% | 23% | 0.216 | 0.97 | 1.3 | 1.87 | 4 | 7 | 0 | 0 | 100% | 1 |
5YFU_AMP_A_403 | 77% | 24% | 0.131 | 0.972 | 1.1 | 1.98 | 2 | 8 | 2 | 0 | 100% | 1 |
5YGA_AMP_A_403 | 70% | 23% | 0.137 | 0.955 | 1.21 | 1.93 | 2 | 9 | 0 | 0 | 100% | 1 |
5YFX_AMP_A_402 | 70% | 30% | 0.138 | 0.956 | 1.26 | 1.52 | 3 | 5 | 0 | 0 | 100% | 1 |
5YG8_AMP_C_402 | 65% | 31% | 0.169 | 0.973 | 1.2 | 1.52 | 3 | 5 | 0 | 0 | 100% | 1 |
5YG9_AMP_A_402 | 58% | 27% | 0.182 | 0.962 | 1.06 | 1.86 | 2 | 9 | 0 | 0 | 100% | 1 |
3LOQ_AMP_A_271 | 100% | 45% | 0.039 | 0.987 | 0.82 | 1.3 | - | 2 | 2 | 0 | 100% | 1 |
7SNB_AMP_A_303 | 100% | 55% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.783 |
4RDH_AMP_C_301 | 100% | 23% | 0.039 | 0.983 | 1.37 | 1.79 | 3 | 6 | 0 | 0 | 100% | 1 |
3CLT_AMP_C_1262 | 100% | 40% | 0.046 | 0.987 | 0.91 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
5VEO_AMP_A_524 | 100% | 40% | 0.046 | 0.987 | 0.86 | 1.47 | - | 3 | 1 | 0 | 100% | 1 |