NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 5YQ5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5YQ5_NAG_A_504 | 69% | 42% | 0.112 | 0.927 | 0.62 | 1.61 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_503 | 67% | 48% | 0.116 | 0.925 | 0.61 | 1.38 | - | 2 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_502 | 60% | 32% | 0.149 | 0.933 | 0.71 | 1.96 | - | 2 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_503 | 58% | 28% | 0.102 | 0.88 | 0.77 | 2.07 | - | 5 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_502 | 55% | 41% | 0.14 | 0.908 | 0.67 | 1.6 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_501 | 48% | 39% | 0.141 | 0.885 | 0.71 | 1.66 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_502 | 45% | 21% | 0.165 | 0.895 | 1.05 | 2.2 | 1 | 5 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_503 | 38% | 35% | 0.168 | 0.868 | 0.63 | 1.91 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_502 | 37% | 32% | 0.177 | 0.873 | 0.67 | 1.99 | - | 3 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_D_501 | 17% | 20% | 0.194 | 0.77 | 1 | 2.37 | 1 | 6 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_A_501 | 12% | 44% | 0.189 | 0.719 | 0.57 | 1.55 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_B_503 | 11% | 27% | 0.201 | 0.72 | 0.87 | 2.02 | - | 4 | 0 | 0 | 100% | 0.9333 |
5YQ5_NAG_C_501 | 11% | 38% | 0.265 | 0.786 | 0.75 | 1.66 | - | 4 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |