UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5MQJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5MQJ_UDP_C_301 | 65% | 70% | 0.133 | 0.935 | 0.47 | 0.69 | - | 1 | 3 | 0 | 100% | 1 |
| 5MQJ_UDP_A_301 | 49% | 69% | 0.196 | 0.943 | 0.57 | 0.62 | 1 | - | 0 | 0 | 100% | 1 |
| 5MQJ_UDP_D_301 | 47% | 69% | 0.191 | 0.931 | 0.64 | 0.57 | 1 | - | 5 | 0 | 100% | 1 |
| 5MQJ_UDP_B_301 | 31% | 64% | 0.219 | 0.888 | 0.6 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
