SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 6W1V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6W1V_SQD_a_413 | 62% | 28% | 0.142 | 0.934 | 0.99 | 1.87 | 7 | 12 | 0 | 0 | 100% | 1 |
| 6W1V_SQD_A_409 | 60% | 24% | 0.151 | 0.944 | 1.01 | 2.08 | 4 | 17 | 0 | 0 | 96% | 0.963 |
| 6W1V_SQD_b_720 | 56% | 23% | 0.117 | 0.905 | 1 | 2.16 | 2 | 14 | 0 | 0 | 91% | 0.9074 |
| 6W1V_SQD_B_723 | 44% | 33% | 0.15 | 0.876 | 0.95 | 1.7 | 2 | 11 | 0 | 0 | 100% | 1 |
| 6W1V_SQD_D_409 | 39% | 25% | 0.16 | 0.927 | 0.98 | 2.05 | 4 | 12 | 0 | 0 | 67% | 0.6667 |
| 6W1V_SQD_A_412 | 26% | 44% | 0.163 | 0.853 | 1.05 | 1.12 | 3 | 3 | 0 | 0 | 72% | 0.7222 |
| 6W1V_SQD_f_101 | 24% | 27% | 0.202 | 0.876 | 1.13 | 1.77 | 5 | 13 | 0 | 0 | 76% | 0.7593 |
| 6W1V_SQD_a_415 | 19% | 38% | 0.166 | 0.818 | 1.1 | 1.34 | 2 | 4 | 0 | 0 | 67% | 0.6667 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 78% | 20% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 29% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 76% | 31% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
