PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 7CP5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 7CP5_PGV_C_301 | 85% | 44% | 0.108 | 0.975 | 0.94 | 1.21 | 4 | 4 | 1 | 0 | 100% | 1 |
| 7CP5_PGV_P_307 | 84% | 54% | 0.116 | 0.977 | 0.69 | 1.09 | 2 | 5 | 1 | 0 | 100% | 1 |
| 7CP5_PGV_C_308 | 83% | 54% | 0.111 | 0.979 | 0.84 | 0.93 | 1 | 3 | 2 | 0 | 94% | 0.9412 |
| 7CP5_PGV_N_608 | 75% | 44% | 0.13 | 0.964 | 0.9 | 1.24 | 4 | 5 | 3 | 0 | 100% | 1 |
| 7CP5_PGV_A_606 | 31% | 66% | 0.138 | 0.91 | 0.51 | 0.78 | - | - | 2 | 0 | 43% | 0.4314 |
| 7CP5_PGV_G_102 | 14% | 37% | 0.198 | 0.813 | 0.98 | 1.48 | 1 | 3 | 1 | 0 | 63% | 0.6275 |
| 7CP5_PGV_N_607 | 14% | 78% | 0.194 | 0.835 | 0.36 | 0.52 | - | - | 1 | 0 | 47% | 0.4706 |
| 7CP5_PGV_C_311 | 13% | 22% | 0.192 | 0.815 | 1.17 | 2.06 | 1 | 5 | 2 | 0 | 55% | 0.549 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |
