DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 7RF3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7RF3_DGD_H_102 | 72% | 30% | 0.109 | 0.945 | 1.42 | 1.38 | 14 | 11 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_c_515 | 71% | 36% | 0.123 | 0.954 | 1.12 | 1.37 | 8 | 9 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_C_515 | 67% | 32% | 0.13 | 0.95 | 1.26 | 1.42 | 8 | 9 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_c_517 | 61% | 33% | 0.142 | 0.943 | 1.14 | 1.5 | 8 | 14 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_h_101 | 61% | 32% | 0.128 | 0.926 | 1.22 | 1.47 | 9 | 15 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_C_517 | 58% | 37% | 0.138 | 0.929 | 1.14 | 1.34 | 6 | 11 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_c_516 | 58% | 36% | 0.137 | 0.926 | 1.09 | 1.4 | 5 | 11 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_C_516 | 54% | 31% | 0.149 | 0.923 | 1.25 | 1.49 | 7 | 11 | 0 | 0 | 94% | 0.9394 |
7RF3_DGD_A_414 | 33% | 35% | 0.181 | 0.858 | 1.23 | 1.33 | 8 | 9 | 0 | 0 | 100% | 1 |
7RF3_DGD_B_623 | 24% | 37% | 0.158 | 0.845 | 1.21 | 1.26 | 6 | 5 | 0 | 0 | 67% | 0.6667 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
5B5E_DGD_c_919 | 87% | 44% | 0.076 | 0.957 | 0.94 | 1.23 | 3 | 10 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |