UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8INV designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8INV_UDP_A_501 | 90% | 4% | 0.093 | 0.977 | 3.65 | 1.93 | 10 | 7 | 0 | 0 | 100% | 1 |
8IND_UDP_A_502 | 92% | 4% | 0.089 | 0.979 | 3.74 | 1.91 | 11 | 6 | 0 | 0 | 100% | 1 |
8INJ_UDP_A_501 | 89% | 5% | 0.093 | 0.972 | 3.65 | 1.77 | 11 | 6 | 0 | 0 | 100% | 1 |
8INO_UDP_A_502 | 88% | 4% | 0.101 | 0.977 | 3.64 | 1.94 | 11 | 6 | 1 | 0 | 100% | 1 |
8INA_UDP_A_501 | 87% | 4% | 0.099 | 0.973 | 3.57 | 2 | 10 | 6 | 0 | 0 | 100% | 1 |
8WRJ_UDP_A_502 | 80% | 4% | 0.132 | 0.981 | 3.7 | 1.89 | 11 | 7 | 0 | 0 | 100% | 1 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |