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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Karlsson, A."

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Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Pseudomonas putida (10)
	Homo sapiens (3)
	Mus musculus (3)
	Sparus aurata (3)
	Chlorobaculum tepidum (2)
	Drosophila melanogaster (2)
	Prosthecochloris vibrioformis (2)
	Acinetobacter sp. (1)
	Chloroflexus aurantiacus (1)
	Vaccinia virus (1)

Taxonomy

	Bacteria (15)
	Eukaryota (11)
	Varidnaviria (1)

Experimental Method

X-RAY DIFFRACTION (27)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (12)
	2.0 - 2.5 (7)
	2.5 - 3.0 (6)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (19)
	2005 - 2009 (5)
	2010 - 2014 (2)
	2015 - 2019 (1)

Enzyme Classification Name

	Oxidoreductases (14)
	Transferases (7)

Symmetry Type

	Cyclic (12)
	Dihedral (12)
	Asymmetric (5)

SCOP Classification

	Alpha and beta proteins (a+b) (15)
	All beta proteins (16)
	Alpha and beta proteins (a/b) (7)

AllSelected

1 to 25 of 27 Structures

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1EG9 \| pdb_00001eg9	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE WITH INDOLE BOUND IN THE ACTIVE SITE.

Carredano, E., Karlsson, A., Kauppi, B., Choudhury, D., Parales, R.E., Parales, J.V., Lee, K., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2000) J Mol Biology 296: 701-712

Released	2000-05-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pseudomonas putida
Macromolecule	PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT) (protein) PROTEIN (NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT) (protein)
Unique Ligands	FE, FES, IND, SO4

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1EHW \| pdb_00001ehw	Download File View File

HUMAN NUCLEOSIDE DIPHOSPHATE KINASE 4

Milon, L., Meyer, P., Chiadmi, M., Munier, A., Johansson, M., Karlsson, A., Lascu, I., Capeau, J., Janin, J., Lacombe, M.-L.

(2000) J Biological Chem 275: 14264-14272

Released	2000-05-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	NUCLEOSIDE DIPHOSPHATE KINASE (protein)
Unique Ligands	SO4

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1GUY \| pdb_00001guy	Download File View File

Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases

Dalhus, B., Sarinen, M., Sauer, U.H., Eklund, P., Johansson, K., Karlsson, A., Ramaswamy, S., Bjork, A., Synstad, B., Naterstad, K., Sirevag, R., Eklund, H.

(2002) J Mol Biology 318: 707

Released	2002-02-15
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Chloroflexus aurantiacus
Macromolecule	MALATE DEHYDROGENASE (protein)
Unique Ligands	CD, NAD

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1GUZ \| pdb_00001guz	Download File View File

Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases

Dalhus, B., Sarinen, M., Sauer, U.H., Eklund, P., Johansson, K., Karlsson, A., Ramaswamy, S., Bjork, A., Synstad, B., Naterstad, K., Sirevag, R., Eklund, H.

(2002) J Mol Biology 318: 707

Released	2002-02-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Chlorobaculum tepidum Prosthecochloris vibrioformis
Macromolecule	MALATE DEHYDROGENASE (protein)
Unique Ligands	NAD

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1GV0 \| pdb_00001gv0	Download File View File

Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases

Dalhus, B., Sarinen, M., Sauer, U.H., Eklund, P., Johansson, K., Karlsson, A., Ramaswamy, S., Bjork, A., Synstad, B., Naterstad, K., Sirevag, R., Eklund, H.

(2002) J Mol Biology 318: 707

Released	2002-02-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Chlorobaculum tepidum
Macromolecule	MALATE DEHYDROGENASE (protein)
Unique Ligands	NAD

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1GV1 \| pdb_00001gv1	Download File View File

Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases

Dalhus, B., Sarinen, M., Sauer, U.H., Eklund, P., Johansson, K., Karlsson, A., Ramaswamy, S., Bjork, A., Synstad, B., Naterstad, K., Sirevag, R., Eklund, H.

(2002) J Mol Biology 318: 707

Released	2002-02-20
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Prosthecochloris vibrioformis
Macromolecule	MALATE DEHYDROGENASE (protein)

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1IJN \| pdb_00001ijn	Download File View File

Crystal structure of the transthyretin mutant TTR C10A/Y114C

Eneqvist, T., Karlsson, A., Olofsson, A., Sauer-Eriksson, A.E.

(2005) Biochemistry 44: 13063-13070

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	TRANSTHYRETIN (protein)
Unique Ligands	BME

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1KRH \| pdb_00001krh	Download File View File

X-ray Structure of Benzoate Dioxygenase Reductase

Karlsson, A., Beharry, Z.M., Eby, D.M., Coulter, E.D., Niedle, E.L., Kurtz Jr., D.M., Eklund, H., Ramaswamy, S.

(2002) J Mol Biology 318: 261-272

Released	2002-05-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Acinetobacter sp.
Macromolecule	Benzoate 1,2-Dioxygenase Reductase (protein)
Unique Ligands	FAD, FES, SO4

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1O7G \| pdb_00001o7g	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE WITH NAPHTHALENE BOUND IN THE ACTIVE SITE.

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, NPY, SO4

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1O7H \| pdb_00001o7h	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE WITH OXIDIZED RIESKE IRON SULPHUR CENTER SITE.

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, SO4

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1O7M \| pdb_00001o7m	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE, BINARY COMPLEX WITH DIOXYGEN

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, OXY, SO4

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1O7N \| pdb_00001o7n	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE, TERNARY COMPLEX WITH DIOXYGEN AND INDOLE

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, IND, OXY, SO4

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1O7P \| pdb_00001o7p	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE, PRODUCT COMPLEX

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, NDH, SO4

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1O7W \| pdb_00001o7w	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE, FULLY REDUCED FORM

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2003) Science 299: 1039

Released	2003-02-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, SO4

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1OE0 \| pdb_00001oe0	Download File View File

CRYSTAL STRUCTURE OF DROSOPHILA DEOXYRIBONUCLEOSIDE KINASE IN COMPLEX WITH DTTP

Mikkelsen, N.E., Johansson, K., Karlsson, A., Knecht, W., Andersen, G., Piskur, J., Munch-Petersen, B., Eklund, H.

(2003) Biochemistry 42: 5706

Released	2003-10-23
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Drosophila melanogaster
Macromolecule	DEOXYRIBONUCLEOSIDE KINASE (protein)
Unique Ligands	MG, TTP

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1OT3 \| pdb_00001ot3	Download File View File

Crystal structure of Drosophila deoxyribonucleotide kinase complexed with the substrate deoxythymidine

Mikkelsen, N.E., Johansson, K., Karlsson, A., Knecht, W., Andersen, G., Piskur, J., Munch-Petersen, B., Eklund, H.

(2003) Biochemistry 42: 5706-5712

Released	2003-05-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Drosophila melanogaster
Macromolecule	Deoxyribonucleoside Kinase (protein)
Unique Ligands	SO4, THM

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1SN0 \| pdb_00001sn0	Download File View File

Crystal Structure Of Sea Bream Transthyretin in complex with thyroxine At 1.9A Resolution

Eneqvist, T., Lundberg, E., Karlsson, A., Huang, S., Santos, C.R., Power, D.M., Sauer-Eriksson, A.E.

(2004) J Biological Chem 279: 26411-26416

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Sparus aurata
Macromolecule	transthyretin (protein)
Unique Ligands	SO4, T44

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1SN2 \| pdb_00001sn2	Download File View File

Crystal Structure of Sea Bream Transthyretin at 1.90A Resolution

Eneqvist, T., Lundberg, E., Karlsson, A., Huang, S., Cantos, C.R., Power, D.M., Sauer-Eriksson, A.E.

(2004) J Biological Chem 279: 26411-26416

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Sparus aurata
Macromolecule	transthyretin (protein)
Unique Ligands	SO4

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1SN5 \| pdb_00001sn5	Download File View File

Crystal Structure of Sea Bream Transthyretin in complex with Triiodothyronine at 1.90A Resolution

Eneqvist, T., Lundberg, E., Karlsson, A., Huang, S., Cantos, C.R., Power, D.M., Sauer-Eriksson, A.E.

(2004) J Biological Chem 279: 26411-26416

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Sparus aurata
Macromolecule	transthyretin (protein)
Unique Ligands	SO4, T3

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1UUV \| pdb_00001uuv	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE WITH NITRIC OXIDE AND INDOLE BOUND IN THE ACTIVE SITE.

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2005) J Biol Inorg Chem 10: 483

Released	2005-02-09
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	EDO, FE, FES, IND, NO, SO4

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1UUW \| pdb_00001uuw	Download File View File

NAPHTHALENE 1,2-DIOXYGENASE WITH NITRIC OXIDE BOUND IN THE ACTIVE SITE.

Karlsson, A., Parales, J.V., Parales, R.E., Gibson, D.T., Eklund, H., Ramaswamy, S.

(2005) J Biol Inorg Chem 10: 483

Released	2005-02-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas putida
Macromolecule	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT (protein) NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT (protein)
Unique Ligands	FE, FES, NO, SO4

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2J87 \| pdb_00002j87	Download File View File

Structure of vaccinia virus thymidine kinase in complex with dTTP: insights for drug design

El Omari, K., Solaroli, N., Karlsson, A., Balzarini, J., Stammers, D.K.

(2006) BMC Struct Biol 6: 22

Released	2006-11-13
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Vaccinia virus
Macromolecule	THYMIDINE KINASE (protein)
Unique Ligands	MG, TTP, ZN

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2QEL \| pdb_00002qel	Download File View File

Crystal structure of the highly amyloidogenic transthyretin mutant TTR G53S/E54D/L55S- heated protein

Karlsson, A., Sauer-Eriksson, A.E.

(2007) Acta Crystallogr Sect F Struct Biol Cryst Commun 63: 695-700

Released	2007-09-04
Method	X-RAY DIFFRACTION 2.29 Å
Organisms	Homo sapiens
Macromolecule	Transthyretin (protein)

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2QPZ \| pdb_00002qpz	Download File View File

Naphthalene 1,2-dioxygenase Rieske ferredoxin

Brown, E.N., Ramaswamy, S., Karlsson, A., Friemann, R., Parales, J.V., Parales, R., Gibson, D.T.

(2008) J Biol Inorg Chem 13: 1301-1313

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Pseudomonas putida
Macromolecule	Naphthalene 1,2-dioxygenase system ferredoxin subunit (protein)
Unique Ligands	FES

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4AJW \| pdb_00004ajw	Download File View File

Discovery and Optimization of New Benzimidazole- and Benzoxazole-Pyrimidone Selective PI3KBeta Inhibitors for the Treatment of Phosphatase and TENsin homologue (PTEN)-Deficient Cancers

Certal, V., Halley, F., Virone-Oddos, A., Delorme, C., Karlsson, A., Rak, A., Thompson, F., Filoche-Romme, B., El-Ahmad, Y., Carry, J.C., Abecassis, P.Y., Lejeune, P., Bonnevaux, H., Nicolas, J.P., Bertrand, T., Marquette, J.P., Michot, N., Benard, T., Below, P., Vade, I., Chatreaux, F., Lebourg, G., Pilorge, F., Angouillant-Boniface, O., Louboutin, A., Lengauer, C., Schio, L.

(2012) J Med Chem 55: 4788

Released	2012-05-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT DELTA ISOFORM (protein)
Unique Ligands	VWN

1 to 25 of 27 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1EG9 | pdb_00001eg9

1EHW | pdb_00001ehw

1GUY | pdb_00001guy

1GUZ | pdb_00001guz

1GV0 | pdb_00001gv0

1GV1 | pdb_00001gv1

1IJN | pdb_00001ijn

1KRH | pdb_00001krh

1O7G | pdb_00001o7g

1O7H | pdb_00001o7h

1O7M | pdb_00001o7m

1O7N | pdb_00001o7n

1O7P | pdb_00001o7p

1O7W | pdb_00001o7w

1OE0 | pdb_00001oe0

1OT3 | pdb_00001ot3

1SN0 | pdb_00001sn0

1SN2 | pdb_00001sn2

1SN5 | pdb_00001sn5

1UUV | pdb_00001uuv

1UUW | pdb_00001uuw

2J87 | pdb_00002j87

2QEL | pdb_00002qel

2QPZ | pdb_00002qpz

4AJW | pdb_00004ajw