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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Tang, S."

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Search Summary

This query matches 28 Structures.

Refinements

Structure Determination Methodology

experimental (28)

Scientific Name of Source Organism

	Homo sapiens (6)
	Mycobacterium tuberculosis H37Rv (6)
	Severe acute respiratory syndrome coronavirus 2 (5)
	Methylococcus capsulatus str. Bath (3)
	Mus musculus (3)
	HIV-1 M:B_HXB2R (2)
	Saccharomyces cerevisiae S288C (2)
	Trypanosoma cruzi (1)

Taxonomy

	Eukaryota (12)
	Bacteria (9)
	Riboviria (7)

Experimental Method

X-RAY DIFFRACTION (28)

Polymer Entity Type

Protein (28)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (11)
	2.0 - 2.5 (9)
	2.5 - 3.0 (3)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (3)
	2015 - 2019 (12)
	2020 - 2024 (8)
	2025 - 2029 (5)

Enzyme Classification Name

	Oxidoreductases (3)
	Hydrolases (6)
	Transferases (3)

Membrane Protein Annotation

mpstruc (2)

Symmetry Type

	Asymmetric (14)
	Cyclic (11)
	Dihedral (3)

SCOP Classification

	All alpha proteins (3)
	All beta proteins (3)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 28 Structures

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1XMF \| pdb_00001xmf	Download File View File

Structure of Mn(II)-Soaked Apo Methane Monooxygenase Hydroxylase Crystals from M. capsulatus (Bath)

Sazinsky, M.H., Merkx, M., Cadieux, E., Tang, S., Lippard, S.J.

(2004) Biochemistry 43: 16263-16276

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Methylococcus capsulatus str. Bath
Macromolecule	Methane monooxygenase component A alpha chain (protein) Methane monooxygenase component A beta chain (protein) Methane monooxygenase component A gamma chain (protein)
Unique Ligands	CA, MN

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1XMG \| pdb_00001xmg	Download File View File

Crystal structure of apo methane monooxygenase hydroxylase from M. capsulatus (Bath)

Sazinsky, M.H., Merkx, M., Cadieux, E., Tang, S., Lippard, S.J.

(2004) Biochemistry 43: 16263-16276

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Methylococcus capsulatus str. Bath
Macromolecule	Methane monooxygenase component A alpha chain (protein) Methane monooxygenase component A beta chain (protein) Methane monooxygenase component A gamma chain (protein)
Unique Ligands	CA

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1XMH \| pdb_00001xmh	Download File View File

Structure of Co(II) reconstituted methane monooxygenase hydroxylase from M. capsulatus (Bath)

Sazinsky, M.H., Merkx, M., Cadieux, E., Tang, S., Lippard, S.J.

(2004) Biochemistry 43: 16263-16276

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Methylococcus capsulatus str. Bath
Macromolecule	Methane monooxygenase component A alpha chain (protein) Methane monooxygenase component A beta chain (protein) Methane monooxygenase component A gamma chain (protein)
Unique Ligands	CO

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5FD7 \| pdb_00005fd7	Download File View File

X-ray Crystal Structure of ESCRT-III Snf7 core domain (conformation A)

Tang, S., Henne, W.M., Borbat, P.P., Buchkovich, N.J., Freed, J.H., Mao, Y., Fromme, J.C., Emr, S.D.

(2015) Elife 4:

Released	2015-12-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Vacuolar-sorting protein SNF7 (protein)

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5FD9 \| pdb_00005fd9	Download File View File

X-ray Crystal Structure of ESCRT-III Snf7 core domain (conformation B)

Tang, S., Henne, W.M., Borbat, P.P., Buchkovich, N.J., Freed, J.H., Mao, Y., Fromme, J.C., Emr, S.D.

(2015) Elife 4:

Released	2015-12-30
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Vacuolar-sorting protein SNF7 (protein)

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5XDP \| pdb_00005xdp	Download File View File

K11/48-branched teraubiquitin

Liang, L., Gao, S., Tang, S.

To be published

Released	2017-04-19
Method	X-RAY DIFFRACTION 2.376 Å
Organisms	Homo sapiens
Macromolecule	D-ubiquitin (protein) ubiquitin-B (protein)

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6CYJ \| pdb_00006cyj	Download File View File

Mycobacterium tuberculosis transcriptional regulator

Tang, S., Sacchettini, J.

(2019) Nucleic Acids Res 47: 9934-9949

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.699 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	HTH-type transcriptional regulator PrpR (protein)
Unique Ligands	SCA, SF4

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6CYY \| pdb_00006cyy	Download File View File

Mycobacterium tuberculosis transcriptional regulator

Tang, S., Sacchettini, J.

(2019) Nucleic Acids Res 47: 9934-9949

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.506 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	HTH-type transcriptional regulator PrpR (protein)
Unique Ligands	COA, SF4

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6CZ6 \| pdb_00006cz6	Download File View File

Mycobacterium tuberculosis transcriptional regulator

Tang, S., Sacchettini, J.

(2019) Nucleic Acids Res 47: 9934-9949

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	HTH-type transcriptional regulator PrpR (protein)
Unique Ligands	COA, SF4

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6D2S \| pdb_00006d2s	Download File View File

Mycobacterium tuberculosis transcriptional regulator

Tang, S., Sacchettini, J.

(2019) Nucleic Acids Res 47: 9934-9949

Released	2019-04-17
Method	X-RAY DIFFRACTION 1.819 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	HTH-type transcriptional regulator PrpR (protein)
Unique Ligands	CA, CL, EDO, NA

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6D8I \| pdb_00006d8i	Download File View File

Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain

Tang, S., Sacchettini, J.

To be published

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Polyketide synthase (protein)
Unique Ligands	CA, EDO, PGE

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6D8J \| pdb_00006d8j	Download File View File

Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain

Tang, S., Sacchettini, J.

To be published

Released	2018-06-06
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Polyketide synthase (protein)
Unique Ligands	CA, EDO, PG4

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6UMT \| pdb_00006umt	Download File View File

High-affinity human PD-1 PD-L2 complex

Tang, S., Kim, P.S.

(2019) Proc Natl Acad Sci U S A 116: 24500-24506

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.986 Å
Organisms	Homo sapiens
Macromolecule	Programmed cell death 1 ligand 2 (protein) Programmed cell death protein 1 (protein)
Unique Ligands	MG

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6UMU \| pdb_00006umu	Download File View File

Human apo PD-1 triple mutant

Tang, S., Kim, P.S.

(2019) Proc Natl Acad Sci U S A 116: 24500-24506

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.183 Å
Organisms	Homo sapiens
Macromolecule	Programmed cell death protein 1 (protein)
Unique Ligands	CL

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6UMV \| pdb_00006umv	Download File View File

Human apo PD-1 double mutant

Tang, S., Kim, P.S.

(2019) Proc Natl Acad Sci U S A 116: 24500-24506

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.424 Å
Organisms	Homo sapiens
Macromolecule	Programmed cell death protein 1 (protein)
Unique Ligands	CL

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6UX6 \| pdb_00006ux6	Download File View File

Cruzain covalently bound by a vinylsulfone compound

Zhai, X., Tang, S., Chenna, B.C., Meek, T.D., Sacchettini, J.C.

To be published

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Trypanosoma cruzi
Macromolecule	Cruzipain (protein)
Unique Ligands	GOL, TM8

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7OEX \| pdb_00007oex	Download File View File

Crystal structure of RBBP9 in complex with phenylalanine

Fiedler, M., Tang, S., Chin, J.W.

(2022) Nature 602: 701-707

Released	2021-12-22
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Homo sapiens
Macromolecule	Serine hydrolase RBBP9 (protein)
Unique Ligands	PHE

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7Q8T \| pdb_00007q8t	Download File View File

Crystal structure of NAMPT bound to ligand TSY535(compound 9a)

Kraemer, A., Tang, S., Butterworth, S., Knapp, S., Structural Genomics Consortium (SGC)

(2023) Acta Pharm Sin B 13: 709-721

Released	2021-11-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Mus musculus
Macromolecule	Nicotinamide phosphoribosyltransferase (protein)
Unique Ligands	9IY, SO4

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7UX0 \| pdb_00007ux0	Download File View File

Human Sperm TMEM95 Ectodomain

Tang, S., Kim, P.S.

(2022) Proc Natl Acad Sci U S A 119: e2207805119-e2207805119

Released	2022-10-12
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Homo sapiens
Macromolecule	Sperm-egg fusion protein TMEM95 (protein)
Unique Ligands	PGE
Unique branched monosaccharides	BMA, FUC, NAG

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8F3A \| pdb_00008f3a	Download File View File

HIV-1 gp41 coiled-coil pocket IQN17

Bruun, T.U.J., Tang, S., Fernandez, D., Kim, P.S.

(2023) J Biological Chem 299: 103062-103062

Released	2023-03-08
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	IQN17 (protein)
Unique Ligands	ACY, CL

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8F3B \| pdb_00008f3b	Download File View File

HIV-1 gp41 coiled-coil pocket IQN22

Bruun, T.U.J., Tang, S., Fernandez, D., Kim, P.S.

(2023) J Biological Chem 299: 103062-103062

Released	2023-03-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	HIV-1 M:B_HXB2R
Macromolecule	IQN22 (protein)

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8W1T \| pdb_00008w1t	Download File View File

SARS-CoV-2 Main protease bound to a non-covalent non-peptidic HTS hit

Bian, X., Tang, S., Sacchettini, J.C.

(2024) Cell Rep 43: 114929-114929

Released	2024-11-20
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase nsp5 (protein)
Unique Ligands	A1A21, A1AFD, DMS, EDO, GOL, SO4

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8W1U \| pdb_00008w1u	Download File View File

SARS-CoV-2 Main protease bound to non-covalent lead molecule NZ-804

Bian, X., Tang, S., Sacchettini, J.C.

(2024) Cell Rep 43: 114929-114929

Released	2024-11-20
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase nsp5 (protein)
Unique Ligands	A1AFE, DMS

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9CDK \| pdb_00009cdk	Download File View File

SARS-CoV-2 Mpro A173V mutant in complex with small molecule inhibitor Mpro61

Tang, S., Kenneson, J.R., Anderson, K.S.

(2025) ACS Bio Med Chem Au 5: 215-226

Released	2025-02-05
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase nsp5 (protein)
Unique Ligands	CL, DMS, XEK

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9CDL \| pdb_00009cdl	Download File View File

SARS-CoV-2 Mpro E166V/L50F double mutant in complex with small molecule inhibitor Mpro61

Tang, S., Kenneson, J.R., Huynh, K., Anderson, K.S.

(2025) ACS Bio Med Chem Au 5: 215-226

Released	2025-02-05
Method	X-RAY DIFFRACTION 1.52 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase nsp5 (protein)
Unique Ligands	XEK

1 to 25 of 28 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1XMF | pdb_00001xmf

1XMG | pdb_00001xmg

1XMH | pdb_00001xmh

5FD7 | pdb_00005fd7

5FD9 | pdb_00005fd9

5XDP | pdb_00005xdp

6CYJ | pdb_00006cyj

6CYY | pdb_00006cyy

6CZ6 | pdb_00006cz6

6D2S | pdb_00006d2s

6D8I | pdb_00006d8i

6D8J | pdb_00006d8j

6UMT | pdb_00006umt

6UMU | pdb_00006umu

6UMV | pdb_00006umv

6UX6 | pdb_00006ux6

7OEX | pdb_00007oex

7Q8T | pdb_00007q8t

7UX0 | pdb_00007ux0

8F3A | pdb_00008f3a

8F3B | pdb_00008f3b

8W1T | pdb_00008w1t

8W1U | pdb_00008w1u

9CDK | pdb_00009cdk

9CDL | pdb_00009cdl