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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Dao, E.H."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Kitasatospora setae KM-6054 (4)
	Thermus thermophilus HB8 (4)
	Severe acute respiratory syndrome coronavirus 2 (2)
	Streptomyces avidinii (1)

Taxonomy

	Bacteria (9)
	Riboviria (2)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

	Protein (11)
	RNA (4)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (2)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)

Release Date

	2015 - 2019 (8)
	2020 - 2024 (3)

Enzyme Classification Name

Hydrolases (2)

Symmetry Type

	Dihedral (5)
	Asymmetric (4)
	Cyclic (2)

SCOP Classification

All beta proteins (3)

AllSelected

1 to 11 of 11 Structures

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5BR8 \| pdb_00005br8	Download File View File

Ambient-temperature crystal structure of 30S ribosomal subunit from Thermus thermophilus in complex with paromomycin

Sierra, R.G., Gati, C., Laksmono, H., Dao, E.H., Gul, S., Fuller, F., Kern, J., Chatterjee, R., Ibrahim, M., Brewster, A., Young, I.D., Michels-Clark, T., Aquila, A., Mengning, L., Hunter, M.S., Koglin, J.E., Boutet, S., Junco, E.A., Hayes, B., Bogan, M.J., Hampton, C.Y., Puglisi, E.V., Sauter, N.K., Stan, C.A., Zouni, A., Yano, J., Yachandra, V.K., Soltis, S.M., Puglisi, J.D., DeMirci, H.

To be published

Released	2015-11-18
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Unique protein chains: 20 Unique nucleic acid chains: 1
Unique Ligands	MG, PAR, ZN

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5JD2 \| pdb_00005jd2	Download File View File

SFX structure of corestreptavidin-selenobiotin complex

DeMirci, H., Hunter, M.S., Boutet, S.

(2016) Nat Commun 7: 13388-13388

Released	2016-11-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BYY

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6CAO \| pdb_00006cao	Download File View File

Structure of the ribosomal decoding complex at ambient temperature

DeMirci, H.

(2018) RNA 24: 1667-1676

Released	2018-07-25
Method	X-RAY DIFFRACTION 3.45 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Unique protein chains: 20 Unique nucleic acid chains: 3
Unique Ligands	K, MG, PAR, ZN

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6CAR \| pdb_00006car	Download File View File

Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with Sisomicin

DeMirci, H.

(2018) Nucleic Acids Res 46: 9793-9804

Released	2018-07-25
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Unique protein chains: 20 Unique nucleic acid chains: 3
Unique Ligands	MG, SIS, ZN

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6CAS \| pdb_00006cas	Download File View File

Serial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MS

DeMirci, H.

(2018) Nucleic Acids Res 46: 9793-9804

Released	2018-07-25
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Thermus thermophilus HB8
Macromolecule	Unique protein chains: 20 Unique nucleic acid chains: 3
Unique Ligands	EUS, MG, ZN

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6NA3 \| pdb_00006na3	Download File View File

Crystal Structure of Apo-form of ECR

DeMirci, H.

(2022) ACS Cent Sci

Released	2019-12-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	Putative crotonyl-CoA reductase (protein)
Unique Ligands	CL, VES

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6NA4 \| pdb_00006na4	Download File View File

Co crystal structure of ECR with Butryl-CoA

DeMirci, H.

(2022) ACS Cent Sci

Released	2020-03-18
Method	X-RAY DIFFRACTION 1.722 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	Putative crotonyl-CoA reductase (protein)
Unique Ligands	2EC, NAP, NDP, VES, YAS

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6NA5 \| pdb_00006na5	Download File View File

Crystal Structure of ECR in complex with NADP+

DeMirci, H.

(2022) ACS Cent Sci

Released	2019-12-11
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	Putative crotonyl-CoA reductase (protein)
Unique Ligands	NDP

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6NA6 \| pdb_00006na6	Download File View File

Serial Femtosecond X-ray Crystallography Structure of ECR in complex with NADPH

DeMirci, H.

(2022) ACS Cent Sci

Released	2019-12-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	Putative crotonyl-CoA reductase (protein)
Unique Ligands	NDP