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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lee, S.G."

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Search Summary

This query matches 123 Structures.

Refinements

Structure Determination Methodology

experimental (123)

Scientific Name of Source Organism

	Homo sapiens (11)
	Plasmodium falciparum (11)
	Arabidopsis thaliana (8)
	Glycine max (8)
	Bos taurus (6)
	Paenisporosarcina sp. TG-14 (6)
	Thermococcus onnurineus NA1 (6)
	Pseudomonas syringae pv. tomato str. DC3000 (5)
	Plantago major (4)
	Xenopus laevis (4)

More...

Taxonomy

	Eukaryota (74)
	Bacteria (45)
	Archaea (6)
	other sequences (2)

Experimental Method

	X-RAY DIFFRACTION (107)
	ELECTRON MICROSCOPY (16)

Polymer Entity Type

	Protein (123)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (37)
	2.0 - 2.5 (33)
	2.5 - 3.0 (21)
	3.0 - 3.5 (15)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)
	> 4.5 (8)

Release Date

	2005 - 2009 (5)
	2010 - 2014 (36)
	2015 - 2019 (48)
	2020 - 2024 (34)

Enzyme Classification Name

	Translocases (6)
	Transferases (35)
	Oxidoreductases (23)
	Hydrolases (7)
	Lyases (1)
	Ligases (1)

Membrane Protein Annotation

	mpstruc (6)
	OPM (5)
	PDBTM (2)

Symmetry Type

	Asymmetric (64)
	Cyclic (48)
	Dihedral (16)
	Octahedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (18)
	All alpha proteins (6)
	All beta proteins (9)
	Artifacts (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 123 Structures

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2HNH \| pdb_00002hnh	Download File View File

Crystal structure of the catalytic alpha subunit of E. coli replicative DNA polymerase III

Meindert, M.H., Georgescu, R.E., Lee, S., O'Donnell, M., Kuriyan, J.

(2006) Cell 126: 881-892

Released	2006-09-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	DNA polymerase III alpha subunit (protein)
Unique Ligands	PO4

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2HQA \| pdb_00002hqa	Download File View File

Crystal structure of the catalytic alpha subunit of E. Coli replicative DNA polymerase III

Lamers, M.H., Georgescu, R.E., Lee, S.G., O'Donnell, M., Kuriyan, J.

(2006) Cell 126: 881-892

Released	2006-09-19
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Escherichia coli
Macromolecule	DNA polymerase III alpha subunit (protein)
Unique Ligands	PO4

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2JL1 \| pdb_00002jl1	Download File View File

Structural insight into bioremediation of triphenylmethane dyes by Citrobacter sp. triphenylmethane reductase

Kim, Y., Park, H.J., Kwak, S.N., Kim, M.H.

(2008) J Biological Chem 283: 31981

Released	2008-09-23
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Citrobacter sp. MY-5
Macromolecule	TRIPHENYLMETHANE REDUCTASE (protein)
Unique Ligands	GOL, NAP

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2VRB \| pdb_00002vrb	Download File View File

Crystal structure of the Citrobacter sp. triphenylmethane reductase complexed with NADP(H)

Kim, Y., Park, H.J., Kwak, S.N., Lee, J.S., Oh, T.K., Kim, M.H.

(2008) J Biological Chem 283: 31981

Released	2008-09-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Citrobacter sp. MY-5
Macromolecule	TRIPHENYLMETHANE REDUCTASE (protein)
Unique Ligands	NAP

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2VRC \| pdb_00002vrc	Download File View File

Crystal structure of the Citrobacter sp. triphenylmethane reductase complexed with NADP(H)

Kim, Y., Park, H.J., Kwak, S.N., Lee, J.S., Oh, T.K., Kim, M.H.

(2008) J Biological Chem 283: 31981

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Citrobacter sp. MY-5
Macromolecule	TRIPHENYLMETHANE REDUCTASE (protein)

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3RFJ \| pdb_00003rfj	Download File View File

Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering

Kim, H.J., Cheong, H.K., Jeon, Y.H.

(2012) Proc Natl Acad Sci U S A 109: 3299-3304

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Listeria monocytogenes 08-5923 Petromyzon marinus synthetic construct
Macromolecule	Internalin B, repeat modules, Variable lymphocyte receptor (protein)
Unique Ligands	SO4

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3RFS \| pdb_00003rfs	Download File View File

Design of a binding scaffold based on variable lymphocyte receptors of jawless vertebrates by module engineering

Kim, H.J., Cheong, H.K., Jeon, Y.H.

(2012) Proc Natl Acad Sci U S A 109: 3299-3304

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Eptatretus burgeri Listeria monocytogenes 08-5923 synthetic construct
Macromolecule	Internalin B, repeat modules, Variable lymphocyte receptor B (protein)
Unique Ligands	MG

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3UJ6 \| pdb_00003uj6	Download File View File

SeMet Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with SAM and PO4

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.974 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PO4, SAM

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3UJ7 \| pdb_00003uj7	Download File View File

Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with SAM and PO4

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.549 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PO4, SAM

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3UJ8 \| pdb_00003uj8	Download File View File

Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with sinefungin and PO4

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.351 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PO4, SFG

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3UJ9 \| pdb_00003uj9	Download File View File

Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with phosphocholine

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PC

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3UJA \| pdb_00003uja	Download File View File

Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with phosphoethanolamine

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.466 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	OPE

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3UJB \| pdb_00003ujb	Download File View File

Phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with SAH and phosphoethanolamine

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.521 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	OPE, SAH

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3UJC \| pdb_00003ujc	Download File View File

Phosphoethanolamine methyltransferase mutant (H132A) from Plasmodium falciparum in complex with phosphocholine

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.19 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PC

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3UJD \| pdb_00003ujd	Download File View File

Phosphoethanolamine methyltransferase mutant (Y19F) from Plasmodium falciparum in complex with phosphocholine

Lee, S.G., Kim, Y., Alpert, T.D., Nagata, A., Jez, J.M.

(2012) J Biological Chem 287: 1426-1434

Released	2011-11-30
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	PC

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4DT3 \| pdb_00004dt3	Download File View File

Crystal structure of zinc-charged lysozyme

An, Y.J., Jeong, C.S., Cha, S.S.

(2012) Acta Crystallogr D Biol Crystallogr 68: 1253-1258

Released	2012-09-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, EDO, ZN

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4DWZ \| pdb_00004dwz	Download File View File

Crystal Structure of Ton_0340

Lee, S.G., Lee, K.H., Cha, S.S., Oh, B.H.

(2012) Acta Crystallogr D Biol Crystallogr 68: 1253-1258

Released	2013-01-16
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	Hypothetical protein TON_0340 (protein)
Unique Ligands	ZN

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4FC5 \| pdb_00004fc5	Download File View File

Crystal Structure of Ton_0340

Lee, S.G., Lee, K.H., An, Y.J., Cha, S.S., Oh, B.H.

(2012) Acta Crystallogr D Biol Crystallogr 68: 1253-1258

Released	2012-09-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Thermococcus onnurineus NA1
Macromolecule	Putative uncharacterized protein (protein)
Unique Ligands	ZN

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4FGZ \| pdb_00004fgz	Download File View File

Crystal Structure of Phosphoethanolamine Methyltransferase from Plasmodium falciparum in Complex with Amodiaquine

Lee, S.G., Alpert, T.D., Jez, J.M.

(2012) Bioorg Med Chem Lett 22: 4990-4993

Released	2012-07-25
Method	X-RAY DIFFRACTION 1.994 Å
Organisms	Plasmodium falciparum
Macromolecule	Phosphoethanolamine N-methyltransferase (protein)
Unique Ligands	CQA, PO4, SAH

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4G0B \| pdb_00004g0b	Download File View File

Structure of native HCT from Coffea canephora

Lallemand, L.A., McCarthy, J.G., McCarthy, A.A.

(2012) Plant Physiol 160: 249-260

Released	2012-08-01
Method	X-RAY DIFFRACTION 3 Å
Organisms	Coffea canephora
Macromolecule	Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase (protein)
Unique Ligands	SO4

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4G22 \| pdb_00004g22	Download File View File

Structure of a Lys-HCT mutant from Coffea canephora (Crystal form 1)

McCarthy, A.A., Lallemand, L.A., McCarthy, J.G.

(2012) Plant Physiol 160: 249-260

Released	2012-08-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Coffea canephora
Macromolecule	Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase (protein)
Unique Ligands	CL, GOL

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4G2M \| pdb_00004g2m	Download File View File

Structure of a Lys-HCT mutant from Coffea canephora (Crystal form 2)

Lallemand, L.A., McCarthy, J.G., McCarthy, A.A.

(2012) Plant Physiol 160: 249-260

Released	2012-08-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Coffea canephora
Macromolecule	Hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase (protein)

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4GFX \| pdb_00004gfx	Download File View File

Crystal structure of the N-terminal domain of TXNIP

Hwang, J., Kim, M.H.

(2014) Nat Commun 5: 2958-2958

Released	2014-02-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Thioredoxin-interacting protein (protein)
Unique Ligands	GOL

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4KRG \| pdb_00004krg	Download File View File

SeMet Haemonchus contortus Phosphoethanolamine N-methyltransferase 1 in complex with phosphoethanolamine and S-adenosylhomocysteine

Lee, S.G., Jez, J.M.

(2013) Structure 21: 1778-1787

Released	2013-09-25
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Haemonchus contortus
Macromolecule	Phosphoethanolamine N-methyltransferase 1 (protein)
Unique Ligands	BOG, NA, OPE, SAH

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4KRH \| pdb_00004krh	Download File View File

SeMet Haemonchus contortus Phosphoethanolamine N-methyltransferase 2 in complex with S-adenosyl-L-methionine

Lee, S.G., Jez, J.M.

(2013) Structure 21: 1778-1787

Released	2013-09-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Haemonchus contortus
Macromolecule	Phosphoethanolamine N-methyltransferase 2 (protein)
Unique Ligands	SAM

1 to 25 of 123 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2HNH | pdb_00002hnh

2HQA | pdb_00002hqa

2JL1 | pdb_00002jl1

2VRB | pdb_00002vrb

2VRC | pdb_00002vrc

3RFJ | pdb_00003rfj

3RFS | pdb_00003rfs

3UJ6 | pdb_00003uj6

3UJ7 | pdb_00003uj7

3UJ8 | pdb_00003uj8

3UJ9 | pdb_00003uj9

3UJA | pdb_00003uja

3UJB | pdb_00003ujb

3UJC | pdb_00003ujc

3UJD | pdb_00003ujd

4DT3 | pdb_00004dt3

4DWZ | pdb_00004dwz

4FC5 | pdb_00004fc5

4FGZ | pdb_00004fgz

4G0B | pdb_00004g0b

4G22 | pdb_00004g22

4G2M | pdb_00004g2m

4GFX | pdb_00004gfx

4KRG | pdb_00004krg

4KRH | pdb_00004krh