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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Mukherjee, A."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Dubowvirus dv80alpha (5)
	Physeter macrocephalus (3)
	Homo sapiens (2)
	Kitasatospora setae KM-6054 (2)
	Danio rerio (1)
	Drosophila melanogaster (1)
	Methanocaldococcus jannaschii (1)
	Methanocaldococcus jannaschii DSM 2661 (1)
	Saccharolobus solfataricus (1)
	Staphylococcus phage 80alpha (1)

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Taxonomy

	Eukaryota (7)
	Duplodnaviria (6)
	Archaea (3)
	Bacteria (2)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (10)
	ELECTRON MICROSCOPY (6)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (7)
	2.0 - 2.5 (3)
	2.5 - 3.0 (1)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	2010 - 2014 (6)
	2015 - 2019 (2)
	2020 - 2024 (9)

Enzyme Classification Name

	Oxidoreductases (3)
	Ligases (2)
	Transferases (1)

Symmetry Type

	Asymmetric (10)
	Cyclic (5)
	Icosahedral (2)

SCOP Classification

	All alpha proteins (3)
	All beta proteins (1)
	Alpha and beta proteins (a/b) (2)
	Artifacts (2)

AllSelected

1 to 17 of 17 Structures

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4FWX	Download File View File

Aquoferric F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin)

Gao, Y.-G., Stoner-Ma, D., Robinson, H., Petrik, I.D., Miner, K.D., Lu, Y.

(2012) Angew Chem Int Ed Engl 51: 5589-5592

Released	2012-07-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Physeter macrocephalus
Macromolecule	Myoglobin (protein)
Unique Ligands	HEM

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4FWY	Download File View File

F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin) with copper bound

Gao, Y.-G., Robinson, H., Petrik, I.D., Miner, K.D., Lu, Y.

(2012) Angew Chem Int Ed Engl 51: 5589-5592

Released	2012-07-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Physeter macrocephalus
Macromolecule	Myoglobin (protein)
Unique Ligands	CU, HEM

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4FWZ	Download File View File

Aquoferric CuB myoglobin (L29H F43H sperm whale myoglobin)

Gao, Y.-G., Robinson, H., Petrik, I.D., Miner, K.D., Lu, Y.

(2012) Angew Chem Int Ed Engl 51: 5589-5592

Released	2012-07-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Physeter macrocephalus
Macromolecule	Myoglobin (protein)
Unique Ligands	HEM

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4HK4	Download File View File

Crystal structure of apo Tyrosine-tRNA ligase mutant protein

Yu, Y., Zhou, Q., Dong, J., Li, J., Xiaoxuan, L., Mukherjee, A., Ouyang, H., Nilges, M., Li, H., Gao, F., Gong, W., Lu, Y., Wang, J.

To be published

Released	2013-04-17
Method	X-RAY DIFFRACTION 2.298 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Tyrosine--tRNA ligase (protein)
Unique Ligands	PEG

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4HPW	Download File View File

Crystal structure of Tyrosine-tRNA ligase mutant complexed with unnatural amino acid 3-o-methyl-Tyrosine

Yu, Y., Zhou, Q., Dong, J., Li, J., Xiaoxuan, L., Mukherjee, A., Ouyang, H., Nilges, M., Li, H., Gao, F., Gong, W., Lu, Y., Wang, J.

To be published

Released	2013-10-30
Method	X-RAY DIFFRACTION 1.998 Å
Organisms	Methanocaldococcus jannaschii DSM 2661
Macromolecule	Tyrosine--tRNA ligase (protein)
Unique Ligands	3YM

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4N5T	Download File View File

The 1.7A Crystal Structure of MDMX with a Stapled Peptide, ATSP-7041

Graves, B.J., Lukacs, C., Janson, C.A.

(2013) Proc Natl Acad Sci U S A 110: E3445-E3454

Released	2013-11-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Danio rerio synthetic construct
Macromolecule	ATSP-7041 stapled-peptide (protein) Protein Mdm4 (protein)

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5OAK	Download File View File

Structure of the dmPar3 PDZ1 domain in complex with the dmPar6 PBM

Bruekner, S.R., Wiesner, S.

(2018) Sci Signal 11:

Released	2018-02-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Drosophila melanogaster
Macromolecule	Bazooka, isoform C,LD29223p (protein)
Unique Ligands	GOL

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5ZAU	Download File View File

Complex of the human FYN SH3 and monobody binder

Reddy, P.P., Gulyani, A., Das, R.

(2020) Elife 9:

Released	2019-09-11
Method	SOLUTION NMR
Organisms	Homo sapiens Saccharolobus solfataricus
Macromolecule	Monobody Binder (protein) Tyrosine-protein kinase Fyn (protein)

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6WTE	Download File View File

Structure of radical S-adenosylmethionine methyltransferase, TsrM, from Kitasatospora setae with cobalamin and [4Fe-4S] cluster bound

Knox, H.L., Chen, P.Y.-T., Drennan, C.L., Booker, S.J.

(2021) Nat Chem Biol 17: 485-491

Released	2020-12-23
Method	X-RAY DIFFRACTION 1.67 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	B12-binding domain-containing protein (protein)
Unique Ligands	B12, EDO, SF4

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6WTF	Download File View File

Structure of radical S-adenosylmethionine methyltransferase, TsrM, from Kitasatospora setae with tryptophan substrate and SAM analog (aza-SAM) bound

Knox, H.L., Chen, P.Y.-T., Drennan, C.L., Booker, S.J.

(2021) Nat Chem Biol 17: 485-491

Released	2020-12-23
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Kitasatospora setae KM-6054
Macromolecule	Tryptophan-C2-methyltransferase containing B12-binding domain (protein)
Unique Ligands	B12, SA8, SF4, TRP

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8TBQ	Download File View File

The crystal structure of human VISTA extra cellular domain in complex with Fab fragment of pH-selective anti-VISTA antibody

van der Horst, E.H., Mukherjee, A., Thisted, T.

(2024) Nat Commun 15: 2917-2917

Released	2024-03-20
Method	X-RAY DIFFRACTION 2.593 Å
Organisms	Homo sapiens
Macromolecule	SNS-101 Fab heavy chain (protein) SNS-101 Fab light chain (protein) V-type immunoglobulin domain-containing suppressor of T-cell activation (protein)
Unique Ligands	EDO, NAG