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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Munoz-Escobar, J."

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Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (9)
	Canis lupus familiaris (1)
	Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (1)
	Rattus norvegicus (1)

Taxonomy

	Eukaryota (9)
	Bacteria (1)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (2)
	1.5 - 2.0 (2)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (9)

Enzyme Classification Name

	Transferases (6)
	Ligases (5)

Symmetry Type

	Asymmetric (8)
	Cyclic (2)

SCOP Classification

	All alpha proteins (2)
	Artifacts (2)

AllSelected

1 to 10 of 10 Structures

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3NTW \| pdb_00003ntw	Download File View File

Structure of the MLLE domain of EDD in complex with a PAM2 peptide from Paip1

Kozlov, G., Gehring, K.

(2015) J Biological Chem 290: 22841-22850

Released	2011-07-06
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	E3 ubiquitin-protein ligase UBR5 (protein) Polyadenylate-binding protein-interacting protein 1 (protein)

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5TDA \| pdb_00005tda	Download File View File

Crystal structure of the UBR-box domain from UBR2 in complex with RLWS N-degron

Munoz-Escobar, J., Kozlov, G., Gehring, K.

(2017) Structure 25: 719-729.e3

Released	2017-03-22
Method	X-RAY DIFFRACTION 0.79 Å
Organisms	Homo sapiens
Macromolecule	ARG-LEU-TRP-SER peptide (protein) E3 ubiquitin-protein ligase UBR2 (protein)
Unique Ligands	ZN

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5TDB \| pdb_00005tdb	Download File View File

Crystal structure of the human UBR-box domain from UBR2 in complex with asymmetrically double methylated arginine peptide

Munoz-Escobar, J., Kozlov, G., Gehring, K.

(2017) Structure 25: 719-729.e3

Released	2017-03-22
Method	X-RAY DIFFRACTION 1.101 Å
Organisms	Homo sapiens
Macromolecule	DA2-ILE-PHE-SER peptide (protein) E3 ubiquitin-protein ligase UBR2 (protein)
Unique Ligands	EDO, ZN

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5TDC \| pdb_00005tdc	Download File View File

Crystal structure of the human UBR-box domain from UBR1 in complex with monomethylated arginine peptide.

Kozlov, G., Munoz-Escobar, J., Matta-Camacho, E., Gehring, K.

(2017) Structure 25: 719-729.e3

Released	2017-03-22
Method	X-RAY DIFFRACTION 1.607 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase UBR1 (protein) NMM-ILE-PHE-SER peptide (protein)
Unique Ligands	SO4, ZN

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5TDD \| pdb_00005tdd	Download File View File

Human UBR-box from UBR2 in complex with HIFS peptide

Munoz-Escobar, J., Kozlov, G., Gehring, K.

(2017) Structure 25: 719-729.e3

Released	2017-03-22
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase UBR2 (protein) HIS-ILE-PHE-SER peptide (protein)
Unique Ligands	EDO, ZN

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5UM3 \| pdb_00005um3	Download File View File

Crystal structure of the V122L mutant of human UBR-box domain from UBR2

Munoz Escobar, J., Kozlov, G., Gehring, K.

(2017) Structure 25: 719-729.e3

Released	2017-03-22
Method	X-RAY DIFFRACTION 1.198 Å
Organisms	Homo sapiens
Macromolecule	E3 ubiquitin-protein ligase UBR2 (protein)
Unique Ligands	ZN

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5V8Z \| pdb_00005v8z	Download File View File

Crystal structure of ERp29 D-domain in complex with the P-domain of calmegin

Kozlov, G., Munoz-Escobar, J., Gehring, K.

(2017) Structure 25: 1415-1422.e3

Released	2017-06-21
Method	X-RAY DIFFRACTION 2.105 Å
Organisms	Canis lupus familiaris Homo sapiens
Macromolecule	Calmegin (protein) Endoplasmic reticulum resident protein 29 (protein)

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5V90 \| pdb_00005v90	Download File View File

Crystal structure of ERp29 D-domain in complex with the P-domain of calreticulin

Kozlov, G., Munoz-Escobar, J., Gehring, K.

(2017) Structure 25: 1415-1422.e3

Released	2017-06-21
Method	X-RAY DIFFRACTION 3.255 Å
Organisms	Homo sapiens
Macromolecule	Calreticulin (protein) Endoplasmic reticulum resident protein 29 (protein)
Unique Ligands	GOL

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5VMD \| pdb_00005vmd	Download File View File

Crystal structure of UBR-box from UBR6 in a domain-swapping conformation

Munoz-Escobar, J., Kozlov, G., Gehring, K.

(2017) Protein Sci 26: 2092-2097

Released	2017-07-12
Method	X-RAY DIFFRACTION 2.202 Å
Organisms	Homo sapiens
Macromolecule	F-box only protein 11 (protein)
Unique Ligands	EDO, ZN

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5VRQ \| pdb_00005vrq	Download File View File

Crystal structure of Legionella pneumophila effector AnkC

Kozlov, G., Wong, K., Wang, W., Skubak, P., Munoz-Escobar, J., Liu, Y., Pannu, N.S., Gehring, K., Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)

(2018) Biochem Biophys Res Commun 495: 1002-1007

Released	2017-11-29
Method	X-RAY DIFFRACTION 3.205 Å
Organisms	Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Macromolecule	Ankyrin repeat-containing protein (protein)

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

3NTW | pdb_00003ntw

Structure of the MLLE domain of EDD in complex with a PAM2 peptide from Paip1

5TDA | pdb_00005tda

Crystal structure of the UBR-box domain from UBR2 in complex with RLWS N-degron

5TDB | pdb_00005tdb

Crystal structure of the human UBR-box domain from UBR2 in complex with asymmetrically double methylated arginine peptide

5TDC | pdb_00005tdc

Crystal structure of the human UBR-box domain from UBR1 in complex with monomethylated arginine peptide.

5TDD | pdb_00005tdd

Human UBR-box from UBR2 in complex with HIFS peptide

5UM3 | pdb_00005um3

Crystal structure of the V122L mutant of human UBR-box domain from UBR2

5V8Z | pdb_00005v8z

Crystal structure of ERp29 D-domain in complex with the P-domain of calmegin

5V90 | pdb_00005v90

Crystal structure of ERp29 D-domain in complex with the P-domain of calreticulin

5VMD | pdb_00005vmd

Crystal structure of UBR-box from UBR6 in a domain-swapping conformation

5VRQ | pdb_00005vrq

Crystal structure of Legionella pneumophila effector AnkC

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3NTW | pdb_00003ntw

5TDA | pdb_00005tda

5TDB | pdb_00005tdb

5TDC | pdb_00005tdc

5TDD | pdb_00005tdd

5UM3 | pdb_00005um3

5V8Z | pdb_00005v8z

5V90 | pdb_00005v90

5VMD | pdb_00005vmd

5VRQ | pdb_00005vrq