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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Park, W."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Corynebacterium glutamicum ATCC 13032 (4)
	Bacillus cereus ATCC 14579 (2)
	Corynebacterium glutamicum (2)
	Homo sapiens (1)
	Momordica cochinchinensis (1)
	Pseudomonas aeruginosa (1)
	[Mannheimia] succiniciproducens MBEL55E (1)

Taxonomy

	Bacteria (10)
	Eukaryota (2)

Experimental Method

X-RAY DIFFRACTION (12)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (6)

Release Date

	2005 - 2009 (1)
	2015 - 2019 (6)
	2020 - 2024 (5)

Enzyme Classification Name

	Isomerases (4)
	Lyases (4)
	Oxidoreductases (3)
	Transferases (2)

Symmetry Type

	Cyclic (6)
	Dihedral (4)
	Asymmetric (2)

SCOP Classification

	Alpha and beta proteins (a/b) (3)
	Artifacts (3)
	Alpha and beta proteins (a+b) (2)

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1 to 12 of 12 Structures

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2R4F \| pdb_00002r4f	Download File View File

Substituted Pyrazoles as Hepatselective HMG-COA reductase inhibitors

Pavlovsky, A., Pfefferkorn, J.A., Harris, M.S., Finzel, B.C.

(2008) J Med Chem 51: 31-45

Released	2008-04-29
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	3-hydroxy-3-methylglutaryl-coenzyme A reductase (protein)
Unique Ligands	RIE, SO4

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6CDX \| pdb_00006cdx	Download File View File

High-resolution crystal structure of fluoropropylated cystine knot, binding to alpha-5 beta-6 integrin

Kimura, R., Nix, J., Bongura, C., Chakraborti, S., Gambhir, S., Filipp, F.V.

(2019) Nat Commun 10: 4673-4673

Released	2019-08-14
Method	X-RAY DIFFRACTION 1 Å
Organisms	Momordica cochinchinensis
Macromolecule	cystine knot (fluoropropylated) (protein)

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6ITK \| pdb_00006itk	Download File View File

Crystal structure of malate dehydrogenase from Corynebacterium glutamicum ATCC 13032 in complex with NAD and malate

Seo, H., Kim, K.-J.

(2020) Nat Commun 11: 1970-1970

Released	2019-11-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Malate dehydrogenase (protein)
Unique Ligands	LMR, NAD

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6ITL \| pdb_00006itl	Download File View File

Crystal structure of malate dehydrogenase from Mannheimia succiniciproducens in complex with NAD

Seo, H., Kim, K.-J.

(2020) Nat Commun 11: 1970-1970

Released	2019-11-27
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	[Mannheimia] succiniciproducens MBEL55E
Macromolecule	Malate dehydrogenase (protein)
Unique Ligands	GOL, NAD

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6J57 \| pdb_00006j57	Download File View File

Crystal structure of fumarylpyruvate hydrolase from Corynebacterium glutamicum

Hong, H., Seo, H., Kim, K.-J., Park, W.

(2020) Environ Microbiol 22: 270-285

Released	2019-12-18
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Corynebacterium glutamicum
Macromolecule	Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (protein)
Unique Ligands	EPE, GOL, SO4

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6J5X \| pdb_00006j5x	Download File View File

Crystal structure of fumarylpyruvate hydrolase from Corynebacterium glutamicum in complex with Mn2+ and pyruvate

Hong, H., Seo, H., Kim, K.-J., Park, W.

(2020) Environ Microbiol 22: 270-285

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Corynebacterium glutamicum
Macromolecule	Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (protein)
Unique Ligands	MN, PYR, SO4

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6J5Y \| pdb_00006j5y	Download File View File

Crystal structure of fumarylpyruvate hydrolase from Pseudomonas aeruginosa in complex with Mn2+ and pyruvate

Hong, H., Seo, H., Kim, K.-J., Park, W.

(2020) Environ Microbiol 22: 270-285

Released	2019-12-18
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	FAA hydrolase family protein (protein)
Unique Ligands	MN, PYR

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7CW4 \| pdb_00007cw4	Download File View File

Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579

Hong, J., Kim, K.J.

(2020) Biochem Biophys Res Commun 533: 442-448

Released	2020-10-07
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Bacillus cereus ATCC 14579
Macromolecule	Acetyl-CoA acetyltransferase (protein)
Unique Ligands	GOL

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7CW5 \| pdb_00007cw5	Download File View File

Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579

Hong, J., Kim, K.J.

(2020) Biochem Biophys Res Commun 533: 442-448

Released	2020-10-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus cereus ATCC 14579
Macromolecule	Acetyl-CoA acetyltransferase (protein)
Unique Ligands	COA

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7ETX \| pdb_00007etx	Download File View File

Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (TrpC) from corynebacterium glutamicum

Prak, W.J., Kim, K.-J.

(2021) J Agric Food Chem 69: 12485-12493

Released	2022-05-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Tryptophan biosynthesis protein TrpCF (protein)
Unique Ligands	GOL

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7ETY \| pdb_00007ety	Download File View File

Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpC) from Corynebacterium glutamicum in complex with reduced 1-(O-carboxyphenylamino)-1-deoxyribulose 5-phosphate (rCdRP)

Park, W.J., Kim, K.-J.

(2021) J Agric Food Chem 69: 12485-12493

Released	2022-05-11
Method	X-RAY DIFFRACTION 2.21 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Tryptophan biosynthesis protein TrpCF (protein)
Unique Ligands	137, GOL

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8JB1 \| pdb_00008jb1	Download File View File

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NADP

Son, H.F., Kim, K.J.

(2023) Int J Biol Macromol 255: 128103-128103

Released	2023-12-06
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Glyceraldehyde-3-phosphate dehydrogenase (protein)
Unique Ligands	GOL, NAP

1 to 12 of 12 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2R4F | pdb_00002r4f

Substituted Pyrazoles as Hepatselective HMG-COA reductase inhibitors

6CDX | pdb_00006cdx

High-resolution crystal structure of fluoropropylated cystine knot, binding to alpha-5 beta-6 integrin

6ITK | pdb_00006itk

Crystal structure of malate dehydrogenase from Corynebacterium glutamicum ATCC 13032 in complex with NAD and malate

6ITL | pdb_00006itl

Crystal structure of malate dehydrogenase from Mannheimia succiniciproducens in complex with NAD

6J57 | pdb_00006j57

Crystal structure of fumarylpyruvate hydrolase from Corynebacterium glutamicum

6J5X | pdb_00006j5x

Crystal structure of fumarylpyruvate hydrolase from Corynebacterium glutamicum in complex with Mn2+ and pyruvate

6J5Y | pdb_00006j5y

Crystal structure of fumarylpyruvate hydrolase from Pseudomonas aeruginosa in complex with Mn2+ and pyruvate

7CW4 | pdb_00007cw4

Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579

7CW5 | pdb_00007cw5

Acetyl-CoA acetyltransferase from Bacillus cereus ATCC 14579

7ETX | pdb_00007etx

Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (TrpC) from corynebacterium glutamicum

7ETY | pdb_00007ety

Crystal structure of bifunctional indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase (trpC) from Corynebacterium glutamicum in complex with reduced 1-(O-carboxyphenylamino)-1-deoxyribulose 5-phosphate (rCdRP)

8JB1 | pdb_00008jb1

Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Corynebacterium glutamicum ATCC13032 in complex with NADP

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2R4F | pdb_00002r4f

6CDX | pdb_00006cdx

6ITK | pdb_00006itk

6ITL | pdb_00006itl

6J57 | pdb_00006j57

6J5X | pdb_00006j5x

6J5Y | pdb_00006j5y

7CW4 | pdb_00007cw4

7CW5 | pdb_00007cw5

7ETX | pdb_00007etx

7ETY | pdb_00007ety

8JB1 | pdb_00008jb1