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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Pelle, X."

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Search Summary

This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	Homo sapiens (19)
	Mus musculus (4)
	synthetic construct (2)

Taxonomy

	Eukaryota (23)
	other sequences (2)

Experimental Method

X-RAY DIFFRACTION (23)

Polymer Entity Type

Protein (23)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (14)
	2.5 - 3.0 (6)

Release Date

	2010 - 2014 (11)
	2015 - 2019 (10)
	2020 - 2024 (2)

Enzyme Classification Name

	Transferases (21)
	Hydrolases (2)

Symmetry Type

	Cyclic (16)
	Asymmetric (7)

SCOP Classification

	All alpha proteins (16)
	Alpha and beta proteins (a+b) (5)
	Artifacts (4)
	All beta proteins (1)

AllSelected

1 to 23 of 23 Structures

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3MS9 \| pdb_00003ms9	Download File View File

ABL kinase in complex with imatinib and a fragment (FRAG1) in the myristate pocket

Cowan-Jacob, S.W., Rummel, G., Fendrich, G.

(2010) J Am Chem Soc 132: 7043-7048

Released	2010-05-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mus musculus
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	CL, MS9, STI

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3MSS \| pdb_00003mss	Download File View File

Abl kinase in complex with imatinib and fragment (FRAG2) in the myristate site

Cowan-Jacob, S.W., Rummel, G., Fendrich, G.

(2010) J Am Chem Soc 132: 7043-7048

Released	2010-05-26
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mus musculus
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	MS7, STI

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3N1V \| pdb_00003n1v	Download File View File

Human FPPS COMPLEX WITH FBS_01

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	3N1, PO4

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3N1W \| pdb_00003n1w	Download File View File

Human FPPS COMPLEX WITH FBS_02

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	3N2, PO4

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3N3L \| pdb_00003n3l	Download File View File

Human FPPS complex with FBS_03

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	MS0, PO4

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3N45 \| pdb_00003n45	Download File View File

Human FPPS complex with FBS_04 and zoledronic acid/MG2+

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	3N3, MG, PO4, ZOL

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3N46 \| pdb_00003n46	Download File View File

Human FPPS complex with NOV_980 and zoledronic acid/MG2+

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	3N5, MG, PO4, ZOL

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3N49 \| pdb_00003n49	Download File View File

Human FPPS COMPLEX WITH NOV_292

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	3N4, PO4

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3N5H \| pdb_00003n5h	Download File View File

Human fpps complex with NOV_304

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	GO0, PO4

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3N5J \| pdb_00003n5j	Download File View File

Human fpps complex with NOV_311

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	GO1, PO4

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3N6K \| pdb_00003n6k	Download File View File

Human FPPS complex with NOV_823

Rondeau, J.-M.

(2010) Nat Chem Biol 6: 660-666

Released	2010-08-18
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHASE (protein)
Unique Ligands	BFH, PO4

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5DGM \| pdb_00005dgm	Download File View File

Crystal structure of human FPPS in complex with monophosphonate compound 7

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) Angew Chem Int Ed Engl 54: 14575-14579

Released	2016-07-13
Method	X-RAY DIFFRACTION 2.86 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	59Z, PO4

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5DGN \| pdb_00005dgn	Download File View File

Crystal structure of human FPPS in complex with compound 13

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) ChemMedChem 10: 1884-1891

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	59Y

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5DGS \| pdb_00005dgs	Download File View File

Crystal structure of human FPPS in complex with the monophosphonate compound 15

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) Angew Chem Int Ed Engl 54: 14575-14579

Released	2016-07-13
Method	X-RAY DIFFRACTION 2.62 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	5A7

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5DIQ \| pdb_00005diq	Download File View File

Crystal structure of human FPPS in complex with salicylic acid derivative 3a

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) ChemMedChem 10: 1884-1891

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	5B9, GOL, MG, PO4

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5DJP \| pdb_00005djp	Download File View File

Crystal structure of human FPPS in complex with biaryl compound 5

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) ChemMedChem 10: 1884-1891

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	5BJ, PO4

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5DJR \| pdb_00005djr	Download File View File

Crystal structure of human FPPS in complex with biaryl compound 6

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) ChemMedChem 10: 1884-1891

Released	2015-09-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	5BK, GOL, PO4

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5DJV \| pdb_00005djv	Download File View File

Crystal structure of human FPPS in complex with biaryl compound 8e

Rondeau, J.M., Bourgier, E., Lehmann, S.

(2015) ChemMedChem 10: 1884-1891

Released	2015-10-07
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	5BL

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5MO4 \| pdb_00005mo4	Download File View File

ABL1 kinase (T334I_D382N) in complex with asciminib and nilotinib

Cowan-Jacob, S.W.

(2017) Nature 543: 733-737

Released	2017-04-05
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	AY7, NIL

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6HD4 \| pdb_00006hd4	Download File View File

ABL1 IN COMPLEX WITH COMPOUND 7 AND IMATINIB (STI-571)

Cowan-Jacob, S.W.

(2018) J Med Chem 61: 8120-8135

Released	2018-10-24
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Mus musculus
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	CL, FYW, GOL, STI

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6HD6 \| pdb_00006hd6	Download File View File

ABL1 IN COMPLEX WITH COMPOUND6 AND IMATINIB (STI-571)

Cowan-Jacob, S.W.

(2018) J Med Chem 61: 8120-8135

Released	2018-09-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	Tyrosine-protein kinase ABL1 (protein)
Unique Ligands	CL, FYH, STI

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7KEV \| pdb_00007kev	Download File View File

PCSK9 in complex with a cyclic peptide LDLR disruptor

Spraggon, G., Chopra, R.

(2022) Cell Chem Biol 29: 249

Released	2021-11-24
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Proprotein convertase subtilisin/kexin type 9 (protein) Proprotein convertase subtilisin/kexin type 9 Propeptide (protein) cyclic peptide LDLR disruptor (protein)
Unique Ligands	CA

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7KFA \| pdb_00007kfa	Download File View File

PCSK9 in complex with PCSK9i a 13mer cyclic peptide LDLR disruptor

Chopra, R., Xu, M., Spraggon, G.

(2022) Cell Chem Biol 29: 249

Released	2021-11-10
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL (protein) Proprotein convertase subtilisin/kexin type 9 (protein) Proprotein convertase subtilisin/kexin type 9 Propeptide (protein)
Unique Ligands	CA

1 to 23 of 23 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3MS9 | pdb_00003ms9

3MSS | pdb_00003mss

3N1V | pdb_00003n1v

3N1W | pdb_00003n1w

3N3L | pdb_00003n3l

3N45 | pdb_00003n45

3N46 | pdb_00003n46

3N49 | pdb_00003n49

3N5H | pdb_00003n5h

3N5J | pdb_00003n5j

3N6K | pdb_00003n6k

5DGM | pdb_00005dgm

5DGN | pdb_00005dgn

5DGS | pdb_00005dgs

5DIQ | pdb_00005diq

5DJP | pdb_00005djp

5DJR | pdb_00005djr

5DJV | pdb_00005djv

5MO4 | pdb_00005mo4

6HD4 | pdb_00006hd4

6HD6 | pdb_00006hd6

7KEV | pdb_00007kev

7KFA | pdb_00007kfa