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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "von Schantz, L."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Rhodothermus marinus (9)
	Homo sapiens (2)

Taxonomy

	Bacteria (9)
	Eukaryota (2)

Experimental Method

	X-RAY DIFFRACTION (11)
	NEUTRON DIFFRACTION (1)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (3)
	2.0 - 2.5 (1)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (7)
	2015 - 2019 (1)
	2020 - 2024 (2)

Enzyme Classification Name

Hydrolases (9)

Symmetry Type

Asymmetric (11)

SCOP Classification

	All beta proteins (9)
	Artifacts (7)

AllSelected

1 to 11 of 11 Structures

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Explore in 3D

2Y64 \| pdb_00002y64	Download File View File

Xylopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	XYP

Explore in 3D

2Y6G \| pdb_00002y6g	Download File View File

Cellopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC

Explore in 3D

2Y6H \| pdb_00002y6h	Download File View File

X-2 L110F CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.08 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA

Explore in 3D

2Y6J \| pdb_00002y6j	Download File View File

X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA

Explore in 3D

2Y6K \| pdb_00002y6k	Download File View File

Xylotetraose bound to X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA, CIT
Unique branched monosaccharides	XYP

Explore in 3D

2Y6L \| pdb_00002y6l	Download File View File

Xylopentaose binding X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

von Schantz, L., Hakansson, M., Logan, D.T., Walse, B., Osterlin, J., Nordberg-Karlsson, E., Ohlin, M.

(2012) Glycobiology 22: 948-961

Released	2012-03-07
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA
Unique branched monosaccharides	XYP

Explore in 3D

3JXS \| pdb_00003jxs	Download File View File

Crystal structure of XG34, an evolved xyloglucan binding CBM

Divne, C., Tan, T.-C., Brumer, H., Gullfot, F.

(2009) Proteins 78: 785-789

Released	2009-10-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Rhodothermus marinus
Macromolecule	Xylanase (protein)
Unique Ligands	ACT, CA

Explore in 3D

4BJ0 \| pdb_00004bj0	Download File View File

Xyloglucan binding module (CBM4-2 X2-L110F) in complex with branched xyloses

Schantz, L., Hakansson, M., Logan, D.T., Nordberg-Karlsson, E., Ohlin, M.

(2014) Proteins 82: 3466

Released	2014-04-23
Method	X-RAY DIFFRACTION 1 Å
Organisms	Rhodothermus marinus
Macromolecule	XYLANASE (protein)
Unique Ligands	CA, GLC
Unique branched monosaccharides	BGC, XYS

Explore in 3D

5DPN \| pdb_00005dpn	Download File View File

Engineered CBM X-2 L110F in complex with branched carbohydrate XXXG.

Ohlin, M.

(2015) Biochemistry 54: 6435-6438

Released	2015-10-28
Method	X-RAY DIFFRACTION 1.6 Å NEUTRON DIFFRACTION 1.606 Å
Organisms	Rhodothermus marinus
Macromolecule	Xylanase (protein)
Unique Ligands	CA
Unique branched monosaccharides	BGC, XYS

Explore in 3D

7YXU \| pdb_00007yxu	Download File View File

Crystal structure of agonistic antibody 1618 fab domain bound to human 4-1BB.

Hakansson, M., Rose, N., Petersson, J., Enell Smith, K., Thorolfsson, M., von Schantz, L.

(2023) Mol Cancer Ther 22: 89-101

Released	2023-01-25
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor receptor superfamily member 9 (protein) heavy chain of Fab (protein) light chain of Fab (protein)
Unique Ligands	MN, TMO

Explore in 3D

8OZ3 \| pdb_00008oz3	Download File View File

Crystal structure of scFv ATOR 1017 bound to human 4-1BB

Hakansson, M., Von Schantz, L., Rose, N.

(2023) Cancer Immunol Immunother 72: 4145-4159

Released	2024-03-13
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Single chain Fv (protein) Tumor necrosis factor receptor superfamily member 9 (protein)

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2Y64 | pdb_00002y64

Xylopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

2Y6G | pdb_00002y6g

Cellopentaose binding mutated (X-2 L110F) CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

2Y6H | pdb_00002y6h

X-2 L110F CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

2Y6J | pdb_00002y6j

X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

2Y6K | pdb_00002y6k

Xylotetraose bound to X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

2Y6L | pdb_00002y6l

Xylopentaose binding X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase

3JXS | pdb_00003jxs

Crystal structure of XG34, an evolved xyloglucan binding CBM

4BJ0 | pdb_00004bj0

Xyloglucan binding module (CBM4-2 X2-L110F) in complex with branched xyloses

5DPN | pdb_00005dpn

Engineered CBM X-2 L110F in complex with branched carbohydrate XXXG.

7YXU | pdb_00007yxu

Crystal structure of agonistic antibody 1618 fab domain bound to human 4-1BB.

8OZ3 | pdb_00008oz3

Crystal structure of scFv ATOR 1017 bound to human 4-1BB

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2Y64 | pdb_00002y64

2Y6G | pdb_00002y6g

2Y6H | pdb_00002y6h

2Y6J | pdb_00002y6j

2Y6K | pdb_00002y6k

2Y6L | pdb_00002y6l

3JXS | pdb_00003jxs

4BJ0 | pdb_00004bj0

5DPN | pdb_00005dpn

7YXU | pdb_00007yxu

8OZ3 | pdb_00008oz3