RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Keywords HAS EXACT PHRASE "LYASE/LYASE INHIBITOR"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 430 Structures.

Refinements

Structure Determination Methodology

experimental (430)

Scientific Name of Source Organism

	Homo sapiens (241)
	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (25)
	Salmonella enterica subsp. enterica serovar Typhimurium (19)
	Methanothermobacter thermautotrophicus str. Delta H (18)
	Campylobacter jejuni (17)
	Mycobacterium tuberculosis (14)
	Mycobacterium tuberculosis H37Rv (13)
	Aspergillus terreus (10)
	Methanothermobacter thermautotrophicus (9)
	Staphylococcus epidermidis (7)

More...

Taxonomy

	Eukaryota (281)
	Bacteria (116)
	Archaea (32)
	Duplodnaviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (428)
	NEUTRON DIFFRACTION (4)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (430)

Refinement Resolution (Å)

	0.5 - 1.0 (4)
	1.0 - 1.5 (135)
	1.5 - 2.0 (182)
	2.0 - 2.5 (79)
	2.5 - 3.0 (26)
	3.0 - 3.5 (4)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (8)
	2010 - 2014 (193)
	2015 - 2019 (136)
	2020 - 2024 (92)

Enzyme Classification Name

	Lyases (408)
	Hydrolases (8)
	Transferases (6)

Symmetry Type

	Asymmetric (287)
	Cyclic (124)
	Dihedral (19)
	Tetrahedral (9)
	Octahedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (99)
	All beta proteins (224)
	Alpha and beta proteins (a+b) (24)
	All alpha proteins (15)
	Artifacts (19)

AllSelected

1 to 25 of 430 Structures

Page 1 of 18

Sort by

Explore in 3D

1C29 \| pdb_00001c29	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF BACTERIAL TRYPTOPHAN SYNTHASE WITH THE TRANSITION STATE ANALOGUE INHIBITOR 4-(2-HYDROXYPHENYLTHIO)-1-BUTENYLPHOSPHONIC ACID

Sachpatzidis, A., Dealwis, C., Lubetsky, J.B., Liang, P.H., Anderson, K.S., Lolis, E.

(1999) Biochemistry 38: 12665-12674

Released	2000-01-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	TRYPTOPHAN SYNTHASE (protein)
Unique Ligands	HE1, NA, PLP

Explore in 3D

1Z9Y \| pdb_00001z9y	Download File View File

carbonic anhydrase II in complex with furosemide as sulfonamide inhibitor

Honndorf, V.S., Heine, A., Klebe, G., Supuran, C.T.

To be published

Released	2006-05-23
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase II (protein)
Unique Ligands	BE7, FUN, ZN

Explore in 3D

3C14 \| pdb_00003c14	Download File View File

Complex of GS-Alpha with the Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with Pyrophosphate and Ca

Mou, T.-C., Sprang, S.R.

(2009) Biochemistry 48: 3387-3397

Released	2009-02-03
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Bos taurus Canis lupus familiaris Rattus norvegicus
Macromolecule	Adenylate cyclase type 2 (protein) Adenylate cyclase type 5 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	CA, CL, FOK, GSP, MG, POP

Explore in 3D

3C15 \| pdb_00003c15	Download File View File

Complex of GS-Alpha with the Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with Pyrophosphate and Mg

Mou, T.-C., Sprang, S.R.

(2009) Biochemistry 48: 3387-3397

Released	2009-02-03
Method	X-RAY DIFFRACTION 2.78 Å
Organisms	Bos taurus Canis lupus familiaris Rattus norvegicus
Macromolecule	Adenylate cyclase type 2 (protein) Adenylate cyclase type 5 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	CL, FOK, GSP, MG, POP

Explore in 3D

3C16 \| pdb_00003c16	Download File View File

Complex of GS-Alpha with the Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with Adenosine-5'-Triphosphate and Ca

Mou, T.-C., Sprang, S.R.

(2009) Biochemistry 48: 3387-3397

Released	2009-02-03
Method	X-RAY DIFFRACTION 2.87 Å
Organisms	Bos taurus Canis lupus familiaris Rattus norvegicus
Macromolecule	Adenylate cyclase type 2 (protein) Adenylate cyclase type 5 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	ATP, CA, CL, FOK, GSP, MG

Explore in 3D

3G82 \| pdb_00003g82	Download File View File

Complex of GS-alpha with the catalytic domains of mammalian adenylyl cyclase: complex with MANT-ITP and Mn

Huebner, M., Mou, T.-C., Sprang, S.R., Seifert, R.

To be published

Released	2010-02-16
Method	X-RAY DIFFRACTION 3.11 Å
Organisms	Bos taurus Canis lupus familiaris Rattus norvegicus
Macromolecule	Adenylate cyclase type 2 (protein) Adenylate cyclase type 5 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	CL, FOK, GSP, MG, MI3, MN

Explore in 3D

3IBI \| pdb_00003ibi	Download File View File

The crystal structure of the human carbonic anhydrase II in complex with an aliphatic sulfamate inhibitor

Alterio, V., De Simone, G.

(2009) J Med Chem 52: 5990-5998

Released	2009-09-22
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BOW, CL, HGB, ZN

Explore in 3D

3IBL \| pdb_00003ibl	Download File View File

The crystal structure of the human carbonic anhydrase II in complex with an aliphatic bis-sulfamate inhibitor

Alterio, V., De Simone, G.

(2009) J Med Chem 52: 5990-5998

Released	2009-09-22
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	CL, HGB, O59, ZN

Explore in 3D

3IBN \| pdb_00003ibn	Download File View File

The crystal structure of the human carbonic anhydrase II in complex with an aliphatic bis-sulfamate inhibitor

Alterio, V., De Simone, G.

(2009) J Med Chem 52: 5990-5998

Released	2009-09-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	CL, HGB, O60, ZN

Explore in 3D

3IBU \| pdb_00003ibu	Download File View File

The crystal structure of the human carbonic anhydrase II in complex with an aliphatic sulfamate inhibitor

Alterio, V., De Simone, G.

(2009) J Med Chem 52: 5990-5998

Released	2009-09-22
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	CL, HGB, O48, ZN

Explore in 3D

3IEO \| pdb_00003ieo	Download File View File

The coumarin-binding site in carbonic anhydrase: the antiepileptic lacosamide as an example

Temperini, C., Innocenti, A., Scozzafava, A., Parkkila, S., Supuran, C.T.

(2010) J Med Chem 53: 850-854

Released	2010-01-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	AMJ, BEZ, HG, ZN

Explore in 3D

3K34 \| pdb_00003k34	Download File View File

Human carbonic anhydrase II with a sulfonamide inhibitor

Behnke, C.A., Le Trong, I., Merritt, E.A., Teller, D.C., Stenkamp, R.E.

(2010) Acta Crystallogr D Biol Crystallogr 66: 616-627

Released	2010-05-12
Method	X-RAY DIFFRACTION 0.9 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	GOL, HGB, SUA, ZN

Explore in 3D

3M04 \| pdb_00003m04	Download File View File

Carbonic Anhydrase II in complex with novel sulfonamide inhibitor

Schulze Wischeler, J., Heine, A., Klebe, G., Sandner, N.U.

To be published

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BE7, BE9, ZN

Explore in 3D

3M14 \| pdb_00003m14	Download File View File

Carbonic Anhydrase II in complex with novel sulfonamide inhibitor

Schulze Wischeler, J., Heine, A., Klebe, G., Sandner, N.U.

To be published

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BE7, BEV, ZN

Explore in 3D

3M2N \| pdb_00003m2n	Download File View File

Crystal structure of human carbonic anhydrase isozyme II with 4-{2-[N-(6-chloro-5-nitropyrimidin-4-yl)amino]ethyl}benzenesulfonamide

Grazulis, S., Manakova, E., Golovenko, D.

(2012) Eur J Med Chem 51: 259-270

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BCN, DMS, J74, ZN

Explore in 3D

3M2X \| pdb_00003m2x	Download File View File

Carbonic Anhydrase II in complex with novel sulfonamide inhibitor

Schulze Wischeler, J., Heine, A., Klebe, G.

To be published

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BE7, BEX, ZN

Explore in 3D

3M2Y \| pdb_00003m2y	Download File View File

Carbonic Anhydrase II in complex with novel sulfonamide inhibitor

Schulze Wischeler, J., Heine, A., Klebe, G.

To be published

Released	2011-05-25
Method	X-RAY DIFFRACTION 1.17 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	BE0, BE7, HG, ZN

Explore in 3D

3M3X \| pdb_00003m3x	Download File View File

Crystal structure of human carbonic anhydrase isozyme II with 4-{2-[N-(6-methoxy-5-nitropyrimidin-4-yl)amino]ethyl}benzenesulfonamide

Grazulis, S., Manakova, E., Golovenko, D.

(2010) Bioorg Med Chem 18: 7413-7421

Released	2010-10-20
Method	X-RAY DIFFRACTION 1.68 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	DMS, JS7, ZN

Explore in 3D

3M40 \| pdb_00003m40	Download File View File

Crystal structure of human carbonic anhydrase isozyme II with 4-[N-(6-chloro-5-nitropyrimidin-4-yl)amino]benzenesulfonamide

Grazulis, S., Manakova, E., Golovenko, D.

(2010) Bioorg Med Chem 18: 7413-7421

Released	2010-10-20
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	DMS, J45, ZN

Explore in 3D

3M5E \| pdb_00003m5e	Download File View File

Crystal structure of human carbonic anhydrase isozyme II with 4-{[N-(6-chloro-5-formyl-2-methylthiopyrimidin-4-yl)amino]methyl}benzenesulfonamide

Grazulis, S., Manakova, E., Golovenko, D.

(2010) Bioorg Med Chem 18: 7413-7421

Released	2010-10-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	DMS, JDR, ZN

Explore in 3D

3M67 \| pdb_00003m67	Download File View File

Crystal structure of human carbonic anhydrase isozyme II with 2-chloro-5-[(6,7-dihydro-1H-[1,4]dioxino[2,3-f]benzimidazol-2-ylsulfanyl)acetyl]benzenesulfonamide

Grazulis, S., Manakova, E., Golovenko, D.

(2010) Bioorg Med Chem 18: 7357-7364

Released	2010-11-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Carbonic anhydrase 2 (protein)
Unique Ligands	DMS, E36, ZN

Explore in 3D

3MAA \| pdb_00003maa	Download File View File

Complex of GS-Alpha with the Catalytic Domains of Mammalian Adenylyl Cyclase: Complex with Adenosine 5-O-(l-Thiophosphate) and Low Ca Concentration

Mou, T.-C., Sprang, S.R.

(2009) Biochemistry 48: 3387-3397

Released	2010-04-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Bos taurus Canis lupus familiaris Rattus norvegicus
Macromolecule	Adenylate cyclase type 2 (protein) Adenylate cyclase type 5 (protein) Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein)
Unique Ligands	CA, CL, FKP, GSP, MG, TAT