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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Keywords HAS EXACT PHRASE "PROTEIN TRANSPORT/PROTEIN BINDING"

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This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Homo sapiens (5)
	Mus musculus (4)
	Legionella pneumophila str. Corby (2)
	Saccharomyces cerevisiae S288C (2)
	Bos taurus (1)

Taxonomy

	Eukaryota (10)
	Bacteria (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (6)
	2.5 - 3.0 (1)

Release Date

	2000 - 2004 (1)
	2010 - 2014 (9)

Enzyme Classification Name

Hydrolases (3)

Symmetry Type

Asymmetric (10)

SCOP Classification

	All alpha proteins (4)
	Alpha and beta proteins (a/b) (4)
	All beta proteins (1)
	Artifacts (1)

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1 to 10 of 10 Structures

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1JWG \| pdb_00001jwg	Download File View File

VHS Domain of human GGA1 complexed with cation-independent M6PR C-terminal Peptide

Shiba, T., Takatsu, H., Nogi, T., Matsugaki, N., Kawasaki, M., Igarashi, N., Suzuki, M., Kato, R., Earnest, T., Nakayama, K., Wakatsuki, S.

(2002) Nature 415: 937-941

Released	2002-03-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ADP-ribosylation factor binding protein GGA1 (protein) Cation-independent mannose-6-phosphate receptor (protein)
Unique Ligands	IOD

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3SFV \| pdb_00003sfv	Download File View File

Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila

Yin, K., Lu, D., Zhu, D., Zhang, H., Li, B., Xu, S., Gu, L.

(2012) PLoS Pathog 8: e1002528-e1002528

Released	2012-04-18
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Homo sapiens Legionella pneumophila str. Corby
Macromolecule	LidA protein, substrate of the Dot/Icm system (protein) Ras-related protein Rab-1A (protein)
Unique Ligands	GDP

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3TJZ \| pdb_00003tjz	Download File View File

Crystal Structure of Arf1 Bound to the gamma/zeta-COP Core Complex

Goldberg, J., Yu, X., Breitman, M.

(2012) Cell 148: 530-542

Released	2012-02-22
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Bos taurus Saccharomyces cerevisiae S288C
Macromolecule	ADP-ribosylation factor 1 (protein) Coatomer subunit gamma (protein) Coatomer subunit zeta-1 (protein)
Unique Ligands	GNP, MG

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3TKL \| pdb_00003tkl	Download File View File

Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila

Cheng, W., Yin, K., Lu, D., Li, B., Zhu, D., Chen, Y., Zhang, H., Xu, S., Chai, J., Gu, L.

(2012) PLoS Pathog 8: e1002528-e1002528

Released	2012-06-27
Method	X-RAY DIFFRACTION 2.183 Å
Organisms	Homo sapiens Legionella pneumophila str. Corby
Macromolecule	LidA protein, substrate of the Dot/Icm system (protein) Ras-related protein Rab-1A (protein)
Unique Ligands	GTP, MG

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3UKY \| pdb_00003uky	Download File View File

Mouse importin alpha: yeast CBP80 cNLS complex

Marfori, M., Forwood, J.K., Lonhienne, T.G., Kobe, B.

(2012) Traffic 13: 532-548

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Mus musculus Saccharomyces cerevisiae S288C
Macromolecule	Importin subunit alpha-2 (protein) Nuclear cap-binding protein complex subunit 1 (protein)

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3UKZ \| pdb_00003ukz	Download File View File

Mouse importin alpha: mouse CBP80 cNLS complex

Marfori, M., Forwood, J.K., Lonhienne, T.G., Kobe, B.

(2012) Traffic 13: 532-548

Released	2012-10-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	Importin subunit alpha-2 (protein) Nuclear cap-binding protein subunit 1 (protein)

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3UL0 \| pdb_00003ul0	Download File View File

Mouse importin alpha: mouse CBP80Y8D cNLS complex

Marfori, M., Forwood, J.K., Lonhienne, T.G., Kobe, B.

(2012) Traffic 13: 532-548

Released	2012-10-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	Importin subunit alpha-2 (protein) Nuclear cap-binding protein subunit 1 (protein)

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4E35 \| pdb_00004e35	Download File View File

Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide

Amacher, J.F., Madden, D.R.

(2013) J Biological Chem 288: 5114-5126

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Golgi-associated PDZ and coiled-coil motif-containing protein (protein) iCAL50 peptide (protein)
Unique Ligands	GOL

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4MDR \| pdb_00004mdr	Download File View File

Crystal structure of adaptor protein complex 4 (AP-4) mu4 subunit C-terminal domain D190A mutant, in complex with a sorting peptide from the amyloid precursor protein (APP)

Ross, B.H., Lin, Y., Corales, E.A., Burgos, P.V., Mardones, G.A.

(2014) PLoS One 9: e88147-e88147

Released	2014-03-12
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	AP-4 complex subunit mu-1 (protein) Amyloid beta A4 protein (protein)

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4QXA \| pdb_00004qxa	Download File View File

Crystal structure of the Rab9A-RUTBC2 RBD complex

Zhang, Z., Wang, S., Ding, J.

(2014) Structure 22: 1408-1420

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	Ras-related protein Rab-9A (protein) Small G protein signaling modulator 1 (protein)
Unique Ligands	GTP, MG

1 to 10 of 10 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1JWG | pdb_00001jwg

VHS Domain of human GGA1 complexed with cation-independent M6PR C-terminal Peptide

3SFV | pdb_00003sfv

Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila

3TJZ | pdb_00003tjz

Crystal Structure of Arf1 Bound to the gamma/zeta-COP Core Complex

3TKL | pdb_00003tkl

Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila

3UKY | pdb_00003uky

Mouse importin alpha: yeast CBP80 cNLS complex

3UKZ | pdb_00003ukz

Mouse importin alpha: mouse CBP80 cNLS complex

3UL0 | pdb_00003ul0

Mouse importin alpha: mouse CBP80Y8D cNLS complex

4E35 | pdb_00004e35

Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide

4MDR | pdb_00004mdr

Crystal structure of adaptor protein complex 4 (AP-4) mu4 subunit C-terminal domain D190A mutant, in complex with a sorting peptide from the amyloid precursor protein (APP)

4QXA | pdb_00004qxa

Crystal structure of the Rab9A-RUTBC2 RBD complex

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1JWG | pdb_00001jwg

3SFV | pdb_00003sfv

3TJZ | pdb_00003tjz

3TKL | pdb_00003tkl

3UKY | pdb_00003uky

3UKZ | pdb_00003ukz

3UL0 | pdb_00003ul0

4E35 | pdb_00004e35

4MDR | pdb_00004mdr

4QXA | pdb_00004qxa