Download MendeleyStructural Basis for Specificity of Oxime Based Inhibitors Towards Type II Dehydroquinase from Mycobacterium Tuberculosis
Robinson, D.A., Roszak, A.W., Frederickson, M., Abell, C., Coggins, J.R., Lapthorn, A.J.To be published.
1H0S
3-dehydroquinate dehydratase from Mycobacterium tuberculosis in complex with 3-hydroxyimino-quinic acid
- PDB DOI: https://doi.org/10.2210/pdb1H0S/pdb
- Classification: LYASE
- Organism(s): Mycobacterium tuberculosis H37Rv
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2002-06-27 Released: 2003-07-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.176
- R-Value Work: 0.137
- R-Value Observed: 0.141
Starting Model: experimental
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This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 3-DEHYDROQUINATE DEHYDRATASE | 146 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 EC: 4.2.1.10 |  | |
UniProt | |||||
Find proteins for P9WPX7 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Go to UniProtKB: P9WPX7 | |||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FA6 Query on FA6 | B [auth A] | 3-HYDROXYIMINO QUINIC ACID C7 H11 N O6 WASIBXJFRXJWAR-GKQOBJDDSA-N |  | ||
| SO4 Query on SO4 | C [auth A], D [auth A], E [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | F [auth A], G [auth A], H [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.176
- R-Value Work: 0.137
- R-Value Observed: 0.141
- Space Group: F 2 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 126.856 | α = 90 |
| b = 126.856 | β = 90 |
| c = 126.856 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2003-07-17 Deposition Author(s): Roszak, A.W., Frederickson, M., Abell, C., Coggins, J.R., Lapthorn, A.J.
Revision History (Full details and data files)
- Version 1.0: 2003-07-17
Type: Initial release - Version 1.1: 2011-10-12
Changes: Database references, Derived calculations, Non-polymer description, Other, Structure summary, Version format compliance - Version 1.2: 2023-12-13
Changes: Data collection, Database references, Derived calculations, Other, Refinement description
