CD44 PanDDA analysis group deposition
Bradshaw, W.J., Katis, V.L., Bezerra, G.A., Koekemoer, L., von Delft, F., Bountra, C., Brennan, P.E., Gileadi, O.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
CD44 antigen | 152 | Mus musculus | Mutation(s): 0  Gene Names: Cd44, Ly-24 | ||
UniProt | |||||
Find proteins for P15379 (Mus musculus) Explore P15379  Go to UniProtKB:  P15379 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P15379 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
VZP (Subject of Investigation/LOI) Query on VZP | B [auth A] | N-[(3R)-1,1-dioxo-1lambda~6~-thiolan-3-yl]-N-methyl-N'-propan-2-ylurea C9 H18 N2 O3 S RMWFRPZNASSVCZ-MRVPVSSYSA-N | |||
DMS Query on DMS | C [auth A], D [auth A], E [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | |||
EDO Query on EDO | F [auth A], G [auth A], H [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 31.02 | α = 90 |
b = 82.04 | β = 117.89 |
c = 32.12 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute on Aging (NIH/NIA) | United States | 1RF1AG057443 |