Crystal structure of 3-dehydroquinate dehydratase, type II, from Burkholderia phymatum STM815
Abendroth, J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
3-dehydroquinate dehydratase | 166 | Paraburkholderia phymatum STM815 | Mutation(s): 0 Gene Names: aroQ, Bphy_6025 EC: 4.2.1.10 | ![]() | |
UniProt | |||||
Find proteins for B2JVW0 (Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)) Explore B2JVW0 Go to UniProtKB: B2JVW0 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B2JVW0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TAR Query on TAR | BA [auth E] EA [auth F] HA [auth G] KA [auth H] NA [auth I] | D(-)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-LWMBPPNESA-N | |||
TLA Query on TLA | AA [auth E] CA [auth F] DA [auth F] FA [auth G] GA [auth G] | L(+)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-JCYAYHJZSA-N | |||
CL Query on CL | S [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 152.39 | α = 90 |
b = 152.39 | β = 90 |
c = 177.95 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
MoRDa | phasing |
Coot | model building |