Signalling conformation of cell surface receptor
Dhagat, U., Parker, M.W.To be published.
Experimental Data Snapshot
Starting Models: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Interleukin-3 receptor subunit alpha | A [auth F], B [auth M] | 288 | Homo sapiens | Mutation(s): 1  Gene Names: IL3RA, IL3R | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P26951 (Homo sapiens) Explore P26951  Go to UniProtKB:  P26951 | |||||
PHAROS:  P26951 GTEx:  ENSG00000185291  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P26951 | ||||
Glycosylation | |||||
Glycosylation Sites: 3 | Go to GlyGen: P26951-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytokine receptor common subunit beta | C [auth A], D [auth C] | 216 | Homo sapiens | Mutation(s): 0  Gene Names: CSF2RB, IL3RB, IL5RB | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P32927 (Homo sapiens) Explore P32927  Go to UniProtKB:  P32927 | |||||
PHAROS:  P32927 GTEx:  ENSG00000100368  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P32927 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P32927-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Interleukin-3 | E [auth I], F [auth J] | 118 | Homo sapiens | Mutation(s): 1  Gene Names: IL3 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08700 (Homo sapiens) Explore P08700  Go to UniProtKB:  P08700 | |||||
PHAROS:  P08700 GTEx:  ENSG00000164399  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P08700 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytokine receptor common subunit beta | G [auth B], H [auth D] | 198 | Homo sapiens | Mutation(s): 1  Gene Names: CSF2RB, IL3RB, IL5RB | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P32927 (Homo sapiens) Explore P32927  Go to UniProtKB:  P32927 | |||||
PHAROS:  P32927 GTEx:  ENSG00000100368  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P32927 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | I [auth E], J [auth G] | 4 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G32152BH GlyCosmos:  G32152BH GlyGen:  G32152BH |
Entity ID: 6 | |||||
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Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | K [auth H], L [auth K], N | 3 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G15407YE GlyCosmos:  G15407YE GlyGen:  G15407YE |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | P [auth C] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 111.647 | α = 90 |
b = 157.251 | β = 90 |
c = 168.306 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Aimless | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Funding Organization | Location | Grant Number |
---|---|---|
National Health and Medical Research Council (NHMRC, Australia) | Australia | -- |