Structure of human DNA polymerase eta complexed with A in the template base paired with incoming non-hydrolyzable TTP
Koag, M.C., Lee, S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase eta | 435 | Homo sapiens | Mutation(s): 0  Gene Names: POLH, RAD30, RAD30A, XPV EC: 2.7.7.7 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y253 (Homo sapiens) Explore Q9Y253  Go to UniProtKB:  Q9Y253 | |||||
PHAROS:  Q9Y253 GTEx:  ENSG00000170734  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9Y253 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*CP*AP*TP*AP*AP*TP*GP*AP*CP*GP*CP*T)-3') | B [auth T] | 12 | Homo sapiens | ||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3') | C [auth P] | 8 | Homo sapiens | ||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
1FZ (Subject of Investigation/LOI) Query on 1FZ | D [auth A] | 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine C10 H18 N3 O13 P3 YRKUYVYMPXAOAT-XLPZGREQSA-N | |||
GOL Query on GOL | G [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MG Query on MG | E [auth A], F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 98.7 | α = 90 |
b = 98.7 | β = 90 |
c = 82.447 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
DENZO | data reduction |
HKL-2000 | data scaling |
REFMAC | phasing |
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