6ZK4

Plant nucleoside hydrolase - ZmNRh2b with a bound adenine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.175 
  • R-Value Observed: 0.177 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Plant nucleoside N-ribohydrolases: substrate binding and role in nitrogen storage mobilization

Luptakova, E.Vigouroux, A.Koncitikova, R.Kopecna, M.Zalabak, D.Novak, O.De Diego, N.Zeljkovic, S.C.Plihal, O.Strnad, M.von Schwartzenbarg, K.Kopecny, D.Morera, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Pyrimidine-specific ribonucleoside hydrolase rihAA, B, C, D343Zea maysMutation(s): 0 
Gene Names: 542168ZEAMMB73_Zm00001d031958
UniProt
Find proteins for B6THD4 (Zea mays)
Explore B6THD4 
Go to UniProtKB:  B6THD4
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.175 
  • R-Value Observed: 0.177 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.64α = 90
b = 148.18β = 102.71
c = 88.41γ = 90
Software Package:
Software NamePurpose
BUSTERrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment  



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2022-01-12
    Type: Initial release