8F35

Apo ELIC in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG

PDB DOI: https://doi.org/10.2210/pdb8F35/pdb
EM Map EMD-28832: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Dickeya dadantii
Expression System: Escherichia coli
Mutation(s): No
Membrane Protein: Yes MemProtMD

Deposited: 2022-11-09 Released: 2023-11-15
Deposition Author(s): Dalal, V., Arcario, M.J., Petroff II, J.T., Deitzen, N.M., Tan, B.K., Brannigan, G., Cheng, W.W.L.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Apo ELIC in spMSP1D1 nanodiscs with 2:1:1 POPC:POPE:POPG

Dalal, V., Arcario, M.J., Petroff II, J.T., Deitzen, N.M., Tan, B.K., Brannigan, G., Cheng, W.W.L.

To be published.

Macromolecule Content

Total Structure Weight: 184.4 kDa
Atom Count: 12,525
Modelled Residue Count: 1,535
Deposited Residue Count: 1,610
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Erwinia chrysanthemi ligand-gated ion channel	A [auth E], B [auth D], C, D [auth B], E [auth A]	322	Dickeya dadantii	Mutation(s): 0 Gene Names: Dda3937_00520 Membrane Entity: Yes
UniProt
Find proteins for E0SJQ4 (Dickeya dadantii (strain 3937)) Explore E0SJQ4 Go to UniProtKB: E0SJQ4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	E0SJQ4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.17 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-11-15

Deposition Author(s):

Petroff II, J.T.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)	United States	GM137957

Revision History (Full details and data files)

Version 1.0: 2023-11-15
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.