Ultrafast structural transitions in an azobenzene photoswitch at near-atomic resolution
Weinert, T., Wranik, M., Seidel, H.-P., Church, J., Steinmetz, M.O., Schapiro, I., Standfuss, J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin alpha-1B chain | 451 | Bos taurus | Mutation(s): 0  EC: 3.6.5 | ||
UniProt | |||||
Find proteins for P81947 (Bos taurus) Explore P81947  Go to UniProtKB:  P81947 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P81947 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tubulin beta-2B chain | 445 | Bos taurus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q6B856 (Bos taurus) Explore Q6B856  Go to UniProtKB:  Q6B856 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6B856 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Designed Ankyrin Repeat Protein (DARPIN) D1 | C [auth F] | 169 | synthetic construct | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GTP Query on GTP | E [auth A], H [auth B] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N | |||
IBL (Subject of Investigation/LOI) Query on IBL | G [auth B] | Azo-Combretastatin A4 (cis) C16 H18 N2 O5 AIRZFEKQGRSBNX-UHFFFAOYSA-N | |||
CA Query on CA | F [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
MG Query on MG | D [auth A], I [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 74.53 | α = 90 |
b = 92.58 | β = 96.71 |
c = 83.99 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
CrystFEL | data reduction |
CrystFEL | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Swiss National Science Foundation | Switzerland | 310030_207462 |
Swiss National Science Foundation | Switzerland | 310030_197674 |
Swiss National Science Foundation | Switzerland | 310030_192566 |
Swiss National Science Foundation | Switzerland | CRSII5_213507 |