Retrograde intraflagellar transport trains are a unique polymeric arrangement of IFT complexes
Lacey, S.E., Graziadei, A., Pigino, G.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 144 | 1,367 | Chlamydomonas reinhardtii | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A9XPA7 (Chlamydomonas reinhardtii) Explore A9XPA7  Go to UniProtKB:  A9XPA7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A9XPA7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport particle protein 140 | 1,409 | Chlamydomonas reinhardtii | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A2K3DGM1 (Chlamydomonas reinhardtii) Explore A0A2K3DGM1  Go to UniProtKB:  A0A2K3DGM1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A2K3DGM1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Osm-6-like protein | C [auth H], N [auth h] | 454 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q946G4 (Chlamydomonas reinhardtii) Explore Q946G4  Go to UniProtKB:  Q946G4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q946G4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 80 | D [auth J], P [auth j] | 765 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A5Z0S9 (Chlamydomonas reinhardtii) Explore A5Z0S9  Go to UniProtKB:  A5Z0S9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A5Z0S9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
IFT54 | E [auth K], Q [auth k] | 510 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8JBY2 (Chlamydomonas reinhardtii) Explore A8JBY2  Go to UniProtKB:  A8JBY2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8JBY2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport particle protein IFT20 | F [auth L], R [auth l] | 135 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q8LLV9 (Chlamydomonas reinhardtii) Explore Q8LLV9  Go to UniProtKB:  Q8LLV9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8LLV9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 7 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Clusterin-associated protein 1 | G [auth N], S [auth n] | 443 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A0A2K3CQB1 (Chlamydomonas reinhardtii) Explore A0A2K3CQB1  Go to UniProtKB:  A0A2K3CQB1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A2K3CQB1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 8 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 74 | H [auth O] | 641 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q6RCE1 (Chlamydomonas reinhardtii) Explore Q6RCE1  Go to UniProtKB:  Q6RCE1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6RCE1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 9 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 81 | I [auth P] | 683 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q68RJ5 (Chlamydomonas reinhardtii) Explore Q68RJ5  Go to UniProtKB:  Q68RJ5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q68RJ5 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 10 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 27 | J [auth Q] | 204 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8HN58 (Chlamydomonas reinhardtii) Explore A8HN58  Go to UniProtKB:  A8HN58 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8HN58 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 11 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 25 | K [auth R] | 189 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for B8LIX8 (Chlamydomonas reinhardtii) Explore B8LIX8  Go to UniProtKB:  B8LIX8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B8LIX8 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 12 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 46 | L [auth S], T [auth s] | 344 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A2T2X4 (Chlamydomonas reinhardtii) Explore A2T2X4  Go to UniProtKB:  A2T2X4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A2T2X4 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 13 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 22 | M [auth T] | 192 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8HME3 (Chlamydomonas reinhardtii) Explore A8HME3  Go to UniProtKB:  A8HME3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8HME3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 14 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 172 | O [auth i], Z [auth I] | 1,755 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q5DM57 (Chlamydomonas reinhardtii) Explore Q5DM57  Go to UniProtKB:  Q5DM57 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q5DM57 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 15 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 122 homolog | U [auth C] | 1,239 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for H9CTG6 (Chlamydomonas reinhardtii) Explore H9CTG6  Go to UniProtKB:  H9CTG6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H9CTG6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 16 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 121 | V [auth D] | 1,224 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8JFR3 (Chlamydomonas reinhardtii) Explore A8JFR3  Go to UniProtKB:  A8JFR3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8JFR3 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 17 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 139 | W [auth E] | 1,355 | Chlamydomonas reinhardtii | Mutation(s): 1  | |
UniProt | |||||
Find proteins for A9XPA6 (Chlamydomonas reinhardtii) Explore A9XPA6  Go to UniProtKB:  A9XPA6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A9XPA6 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 18 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
IFT88 | BA [auth f], X [auth F] | 782 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8JCJ2 (Chlamydomonas reinhardtii) Explore A8JCJ2  Go to UniProtKB:  A8JCJ2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8JCJ2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 19 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
IFT70 | CA [auth g], Y [auth G] | 647 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A8ITN7 (Chlamydomonas reinhardtii) Explore A8ITN7  Go to UniProtKB:  A8ITN7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A8ITN7 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 20 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Intraflagellar transport protein 57 | AA [auth M], DA [auth m] | 469 | Chlamydomonas reinhardtii | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2XQY7 (Chlamydomonas reinhardtii) Explore Q2XQY7  Go to UniProtKB:  Q2XQY7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2XQY7 | ||||
Sequence AnnotationsExpand | |||||
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Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | RELION | 3.1.3 |
Funding Organization | Location | Grant Number |
---|---|---|
European Research Council (ERC) | European Union | -- |
Other government | -- |