3PHB
Crystal Structure of human purine nucleoside phosphorylase in complex with DADMe-ImmG
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
B [auth Q] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
D [auth T] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
E [auth U] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
F [auth Y] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
C [auth S] | SCOP2B Superfamily | Purine and uridine phosphorylases | 8039220 | 3000626 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PNP_UDP_1 | e3phbE1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
B [auth Q] | PNP_UDP_1 | e3phbQ1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
D [auth T] | PNP_UDP_1 | e3phbT1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
E [auth U] | PNP_UDP_1 | e3phbU1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
F [auth Y] | PNP_UDP_1 | e3phbY1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
C [auth S] | PNP_UDP_1 | e3phbS1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth E] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
B [auth Q] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
D [auth T] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
E [auth U] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
F [auth Y] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
C [auth S] | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01048 | Phosphorylase superfamily (PNP_UDP_1) | Phosphorylase superfamily | Members of this family include: purine nucleoside phosphorylase (PNP) Uridine phosphorylase (UdRPase) 5'-methylthioadenosine phosphorylase (MTA phosphorylase) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035994 | Nucleoside phosphorylase superfamily | Homologous Superfamily | |
IPR011268 | Purine nucleoside phosphorylase | Family | |
IPR018099 | Purine phosphorylase, family 2, conserved site | Conserved Site | |
IPR011270 | Purine nucleoside phosphorylase I, inosine/guanosine-specific | Family | |
IPR000845 | Nucleoside phosphorylase domain | Domain |