IM5: 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one
IM5 is a Ligand Of Interest in 3PHB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3PHB_IM5_Q_290 | 85% | 35% | 0.104 | 0.968 | 1.15 | 1.41 | 2 | 2 | 0 | 0 | 100% | 1 |
| 3PHB_IM5_S_291 | 76% | 43% | 0.13 | 0.967 | 0.76 | 1.42 | - | 3 | 0 | 0 | 100% | 1 |
| 3PHB_IM5_U_290 | 69% | 50% | 0.14 | 0.955 | 0.83 | 1.1 | 1 | 2 | 1 | 0 | 100% | 1 |
| 3PHB_IM5_Y_292 | 62% | 41% | 0.171 | 0.965 | 0.88 | 1.39 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3PHB_IM5_E_290 | 61% | 44% | 0.162 | 0.951 | 0.88 | 1.27 | 1 | 2 | 1 | 0 | 100% | 1 |
| 3PHB_IM5_T_291 | 60% | 44% | 0.176 | 0.962 | 0.93 | 1.23 | 2 | 3 | 0 | 0 | 100% | 1 |
| 4EAR_IM5_C_301 | 98% | 9% | 0.052 | 0.973 | 2.02 | 2.36 | 5 | 8 | 0 | 0 | 100% | 1 |
| 5ETJ_IM5_A_301 | 94% | 32% | 0.077 | 0.978 | 1.07 | 1.62 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5UGF_IM5_C_305 | 87% | 44% | 0.099 | 0.972 | 0.85 | 1.31 | - | 1 | 0 | 0 | 100% | 1 |
| 4EB8_IM5_C_302 | 86% | 13% | 0.109 | 0.977 | 2.14 | 1.81 | 4 | 5 | 1 | 0 | 100% | 1 |
| 8SWS_IM5_B_401 | 79% | 50% | 0.115 | 0.961 | 0.76 | 1.15 | 1 | 1 | 0 | 0 | 100% | 1 |
