6W1D
Structure of human mitochondrial complex Nfs1-ISCU2 (WT)-ISD11 with E.coli ACP1 at 1.8 A resolution (NIAU)2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Complex1_LYR | e6w1dB1 | A: alpha bundles | X: LYR protein (From Topology) | H: LYR protein (From Topology) | T: LYR protein | F: Complex1_LYR | ECOD (1.6) |
A | Aminotran_5_C | e6w1dA2 | A: a+b two layers | X: C-terminal domain in some PLP-dependent transferases (From Topology) | H: C-terminal domain in some PLP-dependent transferases (From Topology) | T: C-terminal domain in some PLP-dependent transferases | F: Aminotran_5_C | ECOD (1.6) |
A | Aminotran_5_N | e6w1dA1 | A: a/b three-layered sandwiches | X: PLP-dependent transferases (From Topology) | H: PLP-dependent transferases (From Topology) | T: PLP-dependent transferases | F: Aminotran_5_N | ECOD (1.6) |
C | PP-binding | e6w1dC1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
D | NifU_N | e6w1dD1 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: SufE/NifU (From Topology) | T: SufE/NifU | F: NifU_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.640.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aspartate Aminotransferase | domain 2 | CATH (utative) |
D | 3.90.1010.10 | Alpha Beta | Alpha-Beta Complex | Sufe protein. Chain: A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05347 | Complex 1 protein (LYR family) (Complex1_LYR) | Complex 1 protein (LYR family) | - | Family | |
PF00266 | Aminotransferase class-V (Aminotran_5) | Aminotransferase class-V | This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. | Domain | |
PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain | |
PF01592 | NifU-like N terminal domain (NifU_N) | NifU-like N terminal domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051522 | Iron-sulfur cluster assembly LYR protein | Family | |
IPR008011 | Complex 1 LYR protein domain | Domain | |
IPR045297 | LYRM4, LYR domain | Domain | |
IPR020578 | Aminotransferase class-V, pyridoxal-phosphate binding site | Binding Site | |
IPR000192 | Aminotransferase class V domain | Domain | |
IPR010240 | Cysteine desulfurase IscS | Family | |
IPR016454 | Cysteine desulfurase | Family | |
IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
IPR006162 | Phosphopantetheine attachment site | PTM | |
IPR009081 | Phosphopantetheine binding ACP domain | Domain | |
IPR036736 | ACP-like superfamily | Homologous Superfamily | |
IPR003231 | Acyl carrier protein | Family | |
IPR011339 | Iron-sulfur cluster assembly scaffold protein IscU | Family | |
IPR002871 | NIF system FeS cluster assembly, NifU, N-terminal | Domain |