7CAG
Mycobacterium smegmatis LpqY-SugABC complex in the catalytic intermediate state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | F_UNCLASSIFIED | e7cagE1 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth E] | PF01547 | e7cagE2 | A: a/b three-layered sandwiches | X: Periplasmic binding protein-like II (From Topology) | H: Periplasmic binding protein-like II (From Topology) | T: Periplasmic binding protein-like II | F: PF01547 | ECOD (1.6) |
B [auth A] | PF00528 | e7cagA1 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type I ABC importer transmembrane domain fold (From Topology) | T: Type I ABC importer transmembrane domain fold | F: PF00528 | ECOD (1.6) |
C [auth B] | PF00528 | e7cagB1 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type I ABC importer transmembrane domain fold (From Topology) | T: Type I ABC importer transmembrane domain fold | F: PF00528 | ECOD (1.6) |
D [auth C] | F_UNCLASSIFIED | e7cagC1 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth C] | PF17912 | e7cagC2 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: PF17912 | ECOD (1.6) |
D [auth C] | PF00005 | e7cagC3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005 | ECOD (1.6) |
E [auth D] | F_UNCLASSIFIED | e7cagD2 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth D] | PF17912 | e7cagD3 | A: beta barrels | X: OB-fold | H: MOP-like (From Topology) | T: MOP-like | F: PF17912 | ECOD (1.6) |
E [auth D] | PF00005 | e7cagD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E] | PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family |
B [auth A] | PF00528 | Binding-protein-dependent transport system inner membrane component (BPD_transp_1) | Binding-protein-dependent transport system inner membrane component | - | Family |
C [auth B] | PF00528 | Binding-protein-dependent transport system inner membrane component (BPD_transp_1) | Binding-protein-dependent transport system inner membrane component | - | Family |
D [auth C], E [auth D] | PF17912 | MalK OB fold domain (OB_MalK) | MalK OB fold domain | This entry corresponds to one of two OB-fold domains found in the MalK transport protein. | Domain |
D [auth C], E [auth D] | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | Binding-protein-dependent transport system |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |