Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth G]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104325 3000797 SCOP2B (2022-06-29)
M [auth P]SCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104325 3000797 SCOP2B (2022-06-29)
G [auth F]SCOP2 FamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104192 4002057 SCOP2 (2022-06-29)
G [auth F]SCOP2 SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104193 3000770 SCOP2 (2022-06-29)
N [auth O]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104193 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104195 3000806 SCOP2B (2022-06-29)
O [auth Q]SCOP2 FamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104194 4002082 SCOP2 (2022-06-29)
O [auth Q]SCOP2 SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)8104195 3000806 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth K]Cytochrom_B_Ce7rjeK2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
A [auth K]Cytochrome_Be7rjeK1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
B [auth T]Cytochrom_B_Ce7rjeT2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
B [auth T]Cytochrome_Be7rjeT1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
C [auth A]Peptidase_M16_Ce7rjeA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
C [auth A]Peptidase_M16e7rjeA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
J [auth E]Peptidase_M16_Ce7rjeE2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
J [auth E]Peptidase_M16e7rjeE1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
D [auth B]Peptidase_M16_Ce7rjeB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
D [auth B]Peptidase_M16e7rjeB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
K [auth L]Peptidase_M16_Ce7rjeL2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
K [auth L]Peptidase_M16e7rjeL1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
E [auth D]Cytochrom_C1_C,Cytochrom_C1_Ne7rjeD1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_C,Cytochrom_C1_NECOD (1.6)
L [auth N]Cytochrom_C1_C,Cytochrom_C1_Ne7rjeN1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_C,Cytochrom_C1_NECOD (1.6)
F [auth G]UCR_14kDe7rjeG1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
M [auth P]UCR_14kDe7rjeP1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
G [auth F]UcrQe7rjeF1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
N [auth O]UcrQe7rjeO1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
HUCR_hingee7rjeH1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
O [auth Q]UCR_hingee7rjeQ1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
IUCR_UQCRX_QCR9e7rjeI1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
P [auth R]UCR_UQCRX_QCR9e7rjeR1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
Q [auth C]Rieske_cytochrome_bc1e7rjeC1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
Q [auth C]Rieske_6e7rjeC3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
Q [auth C]UCR_TMe7rjeC2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
R [auth M]Rieske_cytochrome_bc1e7rjeM1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
R [auth M]Rieske_6e7rjeM3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
R [auth M]UCR_TMe7rjeM2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth K],
B [auth T]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
A [auth K],
B [auth T]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
C [auth A],
J [auth E]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
C [auth A],
J [auth E]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
D [auth B],
K [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
D [auth B],
K [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
E [auth D],
L [auth N]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
F [auth G],
M [auth P]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
G [auth F],
N [auth O]
PF02939UcrQ family (UcrQ)UcrQ family- Family
H,
O [auth Q]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
I,
P [auth R]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
Q [auth C],
R [auth M]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
Q [auth C],
R [auth M]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth K],
B [auth T]
Cytochrome b
C [auth A],
J [auth E]
Ubiquinol--cytochrome-c reductase subunit
D [auth B],
K [auth L]
Cytochrome b-c1 complex subunit 2, mitochondrial
E [auth D],
L [auth N]
Ubiquinol--cytochrome-c reductase catalytic subunit
F [auth G],
M [auth P]
Cytochrome b-c1 complex subunit 7
G [auth F],
N [auth O]
Ubiquinol--cytochrome-c reductase subunit 8-
H,
O [auth Q]
Ubiquinol--cytochrome-c reductase subunit 6-
I,
P [auth R]
Ubiquinol--cytochrome-c reductase subunit 9
Q [auth C],
R [auth M]
Cytochrome b-c1 complex subunit Rieske, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth K],
B [auth T]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
A [auth K],
B [auth T]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
A [auth K],
B [auth T]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
A [auth K],
B [auth T]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
A [auth K],
B [auth T]
IPR005798Cytochrome b/b6, C-terminalDomain
A [auth K],
B [auth T]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
A [auth K],
B [auth T]
IPR030689Cytochrome bFamily
A [auth K],
B [auth T]
IPR005797Cytochrome b/b6, N-terminal domainDomain
C [auth A],
J [auth E]
IPR007863Peptidase M16, C-terminalDomain
C [auth A],
J [auth E]
IPR011765Peptidase M16, N-terminalDomain
C [auth A],
J [auth E]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
D [auth B],
K [auth L]
IPR007863Peptidase M16, C-terminalDomain
D [auth B],
K [auth L]
IPR011765Peptidase M16, N-terminalDomain
D [auth B],
K [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
E [auth D],
L [auth N]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
E [auth D],
L [auth N]
IPR002326Cytochrome c1Family
E [auth D],
L [auth N]
IPR009056Cytochrome c-like domainDomain
E [auth D],
L [auth N]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
F [auth G],
M [auth P]
IPR003197Cytochrome b-c1 complex subunit 7Family
F [auth G],
M [auth P]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G [auth F],
N [auth O]
IPR004205Cytochrome b-c1 complex subunit 8Family
G [auth F],
N [auth O]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H,
O [auth Q]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
O [auth Q]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
O [auth Q]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
I,
P [auth R]
IPR008027Cytochrome b-c1 complex subunit 9Family
I,
P [auth R]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
Q [auth C],
R [auth M]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
Q [auth C],
R [auth M]
IPR014349Rieske iron-sulphur proteinFamily
Q [auth C],
R [auth M]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
Q [auth C],
R [auth M]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
Q [auth C],
R [auth M]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
Q [auth C],
R [auth M]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
Q [auth C],
R [auth M]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain