News

Ligand Reports

08/06

Ligand Summary Reports include information about chemical components associated with the entries in a results set, such as formula, molecular weight, name, SMILES string, which PDB entries are related to the ligand, and whether the chemical component is included as a free ligand or as part of the polymer chain.


Ligand Hits
To generate a report, select the Ligand Hits tab for any set of query results.


Generate Reports The Generate Reports options available for Ligand Hits includes a collage of ligand images, or the Ligand Summary Report.


Summary Report
Click on the triangle to reveal the sub-table of PDB IDs.

The Ligand Summary Report lists formula, molecular weight, name, SMILES string, which PDB entries are related to the ligand, and how they are related.

For each ligand, a sub-table can be selected to list all related PDB entries that contain the ligand, the entries that contain the ligand as a free ligand, and entries that contain the ligand as part of a larger, polymeric ligand.

To display this sub-table, select the triangle shown next to the Ligand ID. The display is limited to 15 PDB IDs in each column. For ligands associated with more than 15 PDB entries, the ... [more] link will launch a query for that set of structures.


All tabular report features are also available, including sorting, filtering, export to other report formats, and column customization.



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