RCSB PDB: Search

3D6J \| pdb_00003d6j	Download File View File

Crystal structure of Putative haloacid dehalogenase-like hydrolase from Bacteroides fragilis

Chang, C., Wu, R., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-07-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacteroides fragilis NCTC 9343
Macromolecule	Putative haloacid dehalogenase-like hydrolase (protein)
Unique Ligands	GOL, PO4

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3DNS \| pdb_00003dns	Download File View File

The N-terminal domain of Ribosomal-protein-alanine acetyltransferase from Clostridium acetobutylicum ATCC 824

Nocek, B., Hendricks, R., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-09-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Clostridium acetobutylicum
Macromolecule	Ribosomal-protein-alanine acetyltransferase (protein)

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3E0X \| pdb_00003e0x	Download File View File

The crystal structure of a Lipase-esterase related protein from Clostridium acetobutylicum ATCC 824

Tan, K., Sather, A., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-09-30
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Clostridium acetobutylicum
Macromolecule	Lipase-esterase related protein (protein)
Unique Ligands	OXE

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3E58 \| pdb_00003e58	Download File View File

Crystal structure of putative beta-phosphoglucomutase from Streptococcus thermophilus

Chang, C., Tesar, C., Souvong, K., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-08-26
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Streptococcus thermophilus LMG 18311
Macromolecule	putative Beta-phosphoglucomutase (protein)
Unique Ligands	GOL, SO4

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3EFA \| pdb_00003efa	Download File View File

Crystal structure of putative N-acetyltransferase from Lactobacillus plantarum

Chang, C., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.423 Å
Organisms	Lactiplantibacillus plantarum WCFS1
Macromolecule	Putative Acetyltransferase (protein)
Unique Ligands	FMT, GOL, PO4

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3EUR \| pdb_00003eur	Download File View File

Crystal structure of the C-terminal domain of uncharacterized protein from Bacteroides fragilis NCTC 9343

Nocek, B., Tesar, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-12-02
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Bacteroides fragilis NCTC 9343
Macromolecule	uncharacterized protein (protein)

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3EWL \| pdb_00003ewl	Download File View File

Crystal Structure of Conserved protein BF1870 of Unknown Function from Bacteroides fragilis

Kim, Y., Tesar, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-10-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacteroides fragilis NCTC 9343
Macromolecule	uncharacterized conserved protein BF1870 (protein)

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3F9U \| pdb_00003f9u	Download File View File

Crystal structure of C-terminal domain of putative exported cytochrome C biogenesis-related protein from Bacteroides fragilis

Chang, C., Tesar, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-12-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacteroides fragilis NCTC 9343
Macromolecule	Putative exported cytochrome C biogenesis-related protein (protein)
Unique Ligands	EDO, NO3

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3FES \| pdb_00003fes	Download File View File

Crystal Structure of the ATP-dependent Clp Protease ClpC from Clostridium difficile

Kim, Y., Tesar, C., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-12-16
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Clostridioides difficile 630
Macromolecule	ATP-dependent Clp endopeptidase (protein)
Unique Ligands	EPE, MG, PG4

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3FFY \| pdb_00003ffy	Download File View File

Putative tetrapyrrole (corrin/porphyrin) methyltransferase from Bacteroides fragilis.

Osipiuk, J., Volkart, L., Cobb, G., Kim, Y., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacteroides fragilis NCTC 9343
Macromolecule	Putative tetrapyrrole (Corrin/porphyrin) methylase (protein)
Unique Ligands	SO4

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3FG9 \| pdb_00003fg9	Download File View File

The crystal structure of an universal stress protein UspA family protein from Lactobacillus plantarum WCFS1

Tan, K., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.47 Å
Organisms	Lactiplantibacillus plantarum
Macromolecule	protein of universal stress protein UspA family (protein)
Unique Ligands	ACT, FMT, MG

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3FNB \| pdb_00003fnb	Download File View File

Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159

Kim, Y., Hatzos, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-01-06
Method	X-RAY DIFFRACTION 2.1178 Å
Organisms	Streptococcus mutans UA159
Macromolecule	Acylaminoacyl peptidase SMU_737 (protein)
Unique Ligands	BME, EDO, MG, PGE

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3FQ6 \| pdb_00003fq6	Download File View File

The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI

Tan, K., Tesar, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.36 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	Methyltransferase (protein)
Unique Ligands	SO4

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3FSG \| pdb_00003fsg	Download File View File

Crystal structure of alpha/beta superfamily hydrolase from Oenococcus oeni PSU-1

Nocek, B., Bigelow, L., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-01-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Oenococcus oeni PSU-1
Macromolecule	Alpha/beta superfamily hydrolase (protein)
Unique Ligands	CL, EDO, GOL, SO4

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3FW2 \| pdb_00003fw2	Download File View File

C-terminal domain of putative thiol-disulfide oxidoreductase from Bacteroides thetaiotaomicron.

Osipiuk, J., Li, H., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-01-27
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Bacteroides thetaiotaomicron
Macromolecule	thiol-disulfide oxidoreductase (protein)
Unique Ligands	ACT, EDO

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3G5J \| pdb_00003g5j	Download File View File

Crystal structure of N-terminal domain of putative ATP/GTP binding protein from Clostridium difficile 630

Nocek, B., Bigelow, L., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.76 Å
Organisms	Clostridioides difficile 630
Macromolecule	Putative ATP/GTP binding protein (protein)
Unique Ligands	GOL, PGE

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3GVE \| pdb_00003gve	Download File View File

Crystal structure of calcineurin-like phosphoesterase YfkN from Bacillus subtilis

Kim, Y., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-04-28
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	YfkN protein (protein)
Unique Ligands	CIT, MG, MN

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3GX1 \| pdb_00003gx1	Download File View File

Crystal structure of a domain of lin1832 from Listeria innocua

Tan, K., Rakowski, E., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Listeria innocua Clip11262
Macromolecule	Lin1832 protein (protein)
Unique Ligands	SO4

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3HCZ \| pdb_00003hcz	Download File View File

The crystal structure of a domain of possible thiol-disulfide isomerase from Cytophaga hutchinsonii ATCC 33406.

Tan, K., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-05-19
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Cytophaga hutchinsonii ATCC 33406
Macromolecule	Possible thiol-disulfide isomerase (protein)
Unique Ligands	FMT, SO4

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3HP7 \| pdb_00003hp7	Download File View File

Putative hemolysin from Streptococcus thermophilus.

Osipiuk, J., Hatzos, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-06-16
Method	X-RAY DIFFRACTION 1.53 Å
Organisms	Streptococcus thermophilus LMG 18311
Macromolecule	Hemolysin, putative (protein)
Unique Ligands	EOH

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3HRL \| pdb_00003hrl	Download File View File

Crystal structure of a putative endonuclease-like protein (ngo0050) from neisseria gonorrhoeae

Filippova, E.V., Minasov, G., Shuvalova, L., Kiryukhina, O., Cobb, G., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-06-30
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Neisseria gonorrhoeae FA 1090
Macromolecule	Endonuclease-Like Protein (protein)
Unique Ligands	CL

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3I8O \| pdb_00003i8o	Download File View File

A domain of a functionally unknown protein from Methanocaldococcus jannaschii DSM 2661.

Tan, K., Chhor, G., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-07-21
Method	X-RAY DIFFRACTION 2.638 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	KH domain-containing protein MJ1533 (protein)
Unique Ligands	ACT, CL, FMT, PEG

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3IC6 \| pdb_00003ic6	Download File View File

Crystal structure of putative methylase family protein from Neisseria gonorrhoeae

Chang, C., Marshall, N., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-08-04
Method	X-RAY DIFFRACTION 2.59 Å
Organisms	Neisseria gonorrhoeae FA 1090
Macromolecule	Putative methylase family protein (protein)

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3IL0 \| pdb_00003il0	Download File View File

The crystal structure of the aminopeptidase P,XAA-pro aminopeptidase from Streptococcus thermophilus

Zhang, R., Hatzos, C., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-09-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptococcus thermophilus LMG 18311
Macromolecule	Aminopeptidase P; XAA-pro aminopeptidase (protein)
Unique Ligands	GOL

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3IPJ \| pdb_00003ipj	Download File View File

The crystal structure of one domain of the PTS system, IIabc component from Clostridium difficile

Zhang, R., Bigelow, L., Cobb, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2009-10-20
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Clostridioides difficile 630
Macromolecule	PTS system, IIabc component (protein)
Unique Ligands	ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3D6J | pdb_00003d6j

3DNS | pdb_00003dns

3E0X | pdb_00003e0x

3E58 | pdb_00003e58

3EFA | pdb_00003efa

3EUR | pdb_00003eur

3EWL | pdb_00003ewl

3F9U | pdb_00003f9u

3FES | pdb_00003fes

3FFY | pdb_00003ffy

3FG9 | pdb_00003fg9

3FNB | pdb_00003fnb

3FQ6 | pdb_00003fq6

3FSG | pdb_00003fsg

3FW2 | pdb_00003fw2

3G5J | pdb_00003g5j

3GVE | pdb_00003gve

3GX1 | pdb_00003gx1

3HCZ | pdb_00003hcz

3HP7 | pdb_00003hp7

3HRL | pdb_00003hrl

3I8O | pdb_00003i8o

3IC6 | pdb_00003ic6

3IL0 | pdb_00003il0

3IPJ | pdb_00003ipj