RCSB PDB: Search

1W2Z \| pdb_00001w2z	Download File View File

PSAO and Xenon

Duff, A.P., Trambaiolo, D.M., Cohen, A.E., Ellis, P.J., Juda, G.A., Shepard, E.M., Langley, D.B., Dooley, D.M., Freeman, H.C., Guss, J.M.

(2004) J Mol Biology 344: 599

Released	2004-11-17
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Pisum sativum
Macromolecule	AMINE OXIDASE, COPPER CONTAINING (protein)
Unique Ligands	CU, IOD, MN, NAG, XE

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1W7C \| pdb_00001w7c	Download File View File

PPLO at 1.23 Angstroms

Duff, A.P., Cohen, A.E., Ellis, P.J., Guss, J.M.

(2006) Acta Crystallogr D Biol Crystallogr 62: 1073

Released	2006-08-31
Method	X-RAY DIFFRACTION 1.23 Å
Organisms	Komagataella pastoris
Macromolecule	LYSYL OXIDASE (protein)
Unique Ligands	CA, CL, CU, IMD, MG, NAG
Unique branched monosaccharides	BMA, NAG

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2QH7 \| pdb_00002qh7	Download File View File

MitoNEET is a uniquely folded 2Fe-2S outer mitochondrial membrane protein stabilized by pioglitazone

Paddock, M.L., Wiley, S.E., Axelrod, H.L., Cohen, A.E., Roy, M., Abresch, E.C., Capraro, D., Murphy, A.N., Nechushtai, R., Dixon, J.E., Jennings, P.A.

(2007) Proc Natl Acad Sci U S A 104: 14342-14347

Released	2007-08-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Zinc finger CDGSH-type domain 1 (protein)
Unique Ligands	FES

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3EW0 \| pdb_00003ew0	Download File View File

The novel 2Fe-2S outer mitochondrial protein mitoNEET displays conformational flexibility in its N-terminal cytoplasmic tethering domain

Conlan, A.R., Paddock, M.L., Wiley, S., Axelrod, H.L., Cohen, A.E., Abresch, E.C., Roy, M., Nechushtai, R., Jennings, P.A.

(2009) Acta Crystallogr Sect F Struct Biol Cryst Commun 65: 654-659

Released	2009-07-07
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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3FNV \| pdb_00003fnv	Download File View File

Crystal Structure of Miner1: The Redox-active 2Fe-2S Protein Causative in Wolfram Syndrome 2

Conlan, A.R., Axelrod, H.L., Cohen, A.E., Abresch, E.C., Yee, D., Zuris, J., Nechushtai, R., Jennings, P.A., Paddock, M.L.

(2009) J Mol Biology 392: 143-153

Released	2009-08-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron sulfur domain-containing protein 2 (protein)
Unique Ligands	FES

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3LPQ \| pdb_00003lpq	Download File View File

Human MitoNEET with 2Fe-2S Coordinating Ligand His 87 Replaced With Cys

Conlan, A.R., Homer, C., Axelrod, H.L., Cohen, A.E., Abresch, E.C., Zuris, J., Nechushtai, R., Paddock, M.L., Jennings, P.A.

(2011) Acta Crystallogr D Biol Crystallogr 67: 516-523

Released	2011-06-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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3T42 \| pdb_00003t42	Download File View File

Human aldose reductase in complex with a nitrile-containing IDD inhibitor

Xu, L., Cohen, A.E., Boxer, S.G.

(2011) Biochemistry 50: 8311-8322

Released	2011-10-05
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Homo sapiens
Macromolecule	Aldose reductase (protein)
Unique Ligands	3T4, CIT, NAP

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4EZF \| pdb_00004ezf	Download File View File

The Crystal Structure of a Human MitoNEET mutant with an Ala inserted between Asp 67 and Lys 68

Baxter, E.L., Zuris, J.A., Wang, C., Axelrod, H.L., Cohen, A.E., Paddock, M.L., Nechushtai, R., Onuchic, J.N., Jennings, P.A.

(2013) Proc Natl Acad Sci U S A 110: 948-953

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.19 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron-sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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4F1E \| pdb_00004f1e	Download File View File

The Crystal Structure of a Human MitoNEET mutant with Asp 67 replaced by a Gly

Baxter, E.I., Zuris, J.A., Wang, C., Axelrod, H.L., Cohen, A.E., Paddock, M.L., Nechushtai, R., Onuchic, J.N., Jennings, P.A.

(2013) Proc Natl Acad Sci U S A 110: 948-953

Released	2012-12-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron-sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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4F28 \| pdb_00004f28	Download File View File

The Crystal Structure of a Human MitoNEET mutant with Met 62 Replaced by a Gly

Baxter, E.L., Zuris, J.A., Wang, C., Axelrod, H.L., Cohen, A.E., Paddock, M.L., Nechushtai, R., Onuchic, J.N., Jennings, P.A.

(2013) Proc Natl Acad Sci U S A 110: 948-953

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron-sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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4F2C \| pdb_00004f2c	Download File View File

The Crystal Structure of a Human MitoNEET double mutant in which Gly 66 are Asp 67 are both Replaced with Ala Residues

Baxter, E.L., Zuris, J.A., Wang, C., Axelrod, H.L., Cohen, A.E., Paddock, M.L., Nechushtai, R., Onuchic, J.N., Jennings, P.A.

(2013) Proc Natl Acad Sci U S A 110: 948-953

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Homo sapiens
Macromolecule	CDGSH iron-sulfur domain-containing protein 1 (protein)
Unique Ligands	FES

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4WMG \| pdb_00004wmg	Download File View File

Structure of hen egg-white lysozyme from a microfludic harvesting device using synchrotron radiation (2.5A)

Lyubimov, A.Y., Murray, T.D., Koehl, A., Uervirojnangkoorn, M., Zeldin, O.B., Cohen, A.E., Soltis, S.M., Baxter, E.M., Brewster, A.S., Sauter, N.K., Brunger, A.T., Berger, J.M.

(2015) Acta Crystallogr D Biol Crystallogr 71: 928-940

Released	2015-04-22
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)

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4YUG \| pdb_00004yug	Download File View File

Multiconformer synchrotron model of CypA at 100 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUH \| pdb_00004yuh	Download File View File

Multiconformer synchrotron model of CypA at 150 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUI \| pdb_00004yui	Download File View File

Multiconformer synchrotron model of CypA at 180 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUJ \| pdb_00004yuj	Download File View File

Multiconformer synchrotron model of CypA at 240 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUK \| pdb_00004yuk	Download File View File

Multiconformer synchrotron model of CypA at 260 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUL \| pdb_00004yul	Download File View File

Multiconformer synchrotron model of CypA at 280 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUM \| pdb_00004yum	Download File View File

Multiconformer synchrotron model of CypA at 300 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUN \| pdb_00004yun	Download File View File

Multiconformer synchrotron model of CypA at 310 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUO \| pdb_00004yuo	Download File View File

High-resolution multiconformer synchrotron model of CypA at 273 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-05-20
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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4YUP \| pdb_00004yup	Download File View File

Multiconformer fixed-target X-ray free electron (XFEL) model of CypA at 273 K

Keedy, D.A., Kenner, L.R., Warkentin, M., Woldeyes, R.A., Thompson, M.C., Brewster, A.S., Van Benschoten, A.H., Baxter, E.L., Hopkins, J.B., Uervirojnangkoorn, M., McPhillips, S.E., Song, J., Mori, R.A., Holton, J.M., Weis, W.I., Brunger, A.T., Soltis, M., Lemke, H., Gonzalez, A., Sauter, N.K., Cohen, A.E., van den Bedem, H., Thorne, R.E., Fraser, J.S.

(2015) Elife 4:

Released	2015-10-14
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Peptidyl-prolyl cis-trans isomerase A (protein)

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5F81 \| pdb_00005f81	Download File View File

Acoustic injectors for drop-on-demand serial femtosecond crystallography

Roessler, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.

(2016) Structure 24: 631-640

Released	2016-02-10
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Gallus gallus
Macromolecule	Lysozyme C (protein)
Unique Ligands	CL, NA

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5HL4 \| pdb_00005hl4	Download File View File

Acoustic injectors for drop-on-demand serial femtosecond crystallography

Roessler, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.

(2016) Structure 24: 631-640

Released	2016-01-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Sinorhizobium meliloti 1021
Macromolecule	Ring-hydroxylating dioxygenase (protein)
Unique Ligands	FE, FES, NCO

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5HQD \| pdb_00005hqd	Download File View File

Acoustic injectors for drop-on-demand serial femtosecond crystallography

Roesser, C.G., Agarwal, R., Allaire, M., Alonso-Mori, R., Andi, B., Bachega, J.F.R., Bommer, M., Brewster, A.S., Browne, M.C., Chatterjee, R., Cho, E., Cohen, A.E., Cowan, M., Datwani, S., Davidson, V.L., Defever, J., Eaton, B., Ellson, R., Feng, Y., Ghislain, L.P., Glownia, J.M., Han, G., Hattne, J., Hellmich, J., Heroux, A., Ibrahim, M., Kern, J., Kuczewski, A., Lemke, H.T., Liu, P., Majlof, L., McClintock, W.M., Myers, S., Nelsen, S., Olechno, J., Orville, A.M., Sauter, N.K., Soares, A.S., Soltis, M.S., Song, H., Stearns, R.G., Tran, R., Tsai, Y., Uervirojnangkoorn, M., Wilmot, C.M., Yachandra, V., Yano, J., Yukl, E.T., Zhu, D., Zouni, A.

(2016) Structure 24: 631-640

Released	2016-02-10
Method	X-RAY DIFFRACTION 2.52 Å
Organisms	Thermus thermophilus
Macromolecule	Thermolysin (protein)
Unique Ligands	CA, ZN

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1W2Z | pdb_00001w2z

1W7C | pdb_00001w7c

2QH7 | pdb_00002qh7

3EW0 | pdb_00003ew0

3FNV | pdb_00003fnv

3LPQ | pdb_00003lpq

3T42 | pdb_00003t42

4EZF | pdb_00004ezf

4F1E | pdb_00004f1e

4F28 | pdb_00004f28

4F2C | pdb_00004f2c

4WMG | pdb_00004wmg

4YUG | pdb_00004yug

4YUH | pdb_00004yuh

4YUI | pdb_00004yui

4YUJ | pdb_00004yuj

4YUK | pdb_00004yuk

4YUL | pdb_00004yul

4YUM | pdb_00004yum

4YUN | pdb_00004yun

4YUO | pdb_00004yuo

4YUP | pdb_00004yup

5F81 | pdb_00005f81

5HL4 | pdb_00005hl4

5HQD | pdb_00005hqd