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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Hocker, B."

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Search Summary

This query matches 75 Structures.

Refinements

Structure Determination Methodology

experimental (75)

Scientific Name of Source Organism

	Escherichia coli K-12 (18)
	synthetic construct (16)
	Escherichia coli (12)
	Streptomyces avidinii (9)
	Thermotoga maritima (6)
	Saccharomyces cerevisiae (5)
	Thermotoga maritima MSB8 (5)
	Deinococcus radiodurans (1)
	Escherichia coli 55989 (1)
	Saccharomyces cerevisiae S288C (1)

More...

Taxonomy

	Bacteria (53)
	other sequences (16)
	Eukaryota (6)

Experimental Method

	X-RAY DIFFRACTION (73)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (75)

Refinement Resolution (Å)

	1.0 - 1.5 (22)
	1.5 - 2.0 (36)
	2.0 - 2.5 (11)
	2.5 - 3.0 (2)
	3.0 - 3.5 (2)

Release Date

	2005 - 2009 (6)
	2010 - 2014 (8)
	2015 - 2019 (15)
	2020 - 2024 (46)

Enzyme Classification Name

	Lyases (9)
	Isomerases (1)

Symmetry Type

	Asymmetric (44)
	Cyclic (25)
	Dihedral (9)

SCOP Classification

	Alpha and beta proteins (a/b) (17)
	All alpha proteins (13)
	Artifacts (12)
	Alpha and beta proteins (a+b) (5)
	All beta proteins (9)

AllSelected

1 to 25 of 75 Structures

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2GHA \| pdb_00002gha	Download File View File

Thermotoga maritima maltotriose binding protein bound with maltotriose

Cuneo, M.J., Changela, A., Hocker, B., Beese, L.S., Hellinga, H.W.

To be published

Released	2007-02-06
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Thermotoga maritima MSB8
Macromolecule	maltose ABC transporter, periplasmic maltose-binding protein (protein)
Unique branched monosaccharides	GLC

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2GHB \| pdb_00002ghb	Download File View File

Thermotoga maritima maltotriose binding protein, ligand free form

Cuneo, M.J., Changela, A., Hocker, B., Beese, L.S., Hellinga, H.W.

To be published

Released	2007-02-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermotoga maritima MSB8
Macromolecule	maltose ABC transporter, periplasmic maltose-binding protein (protein)

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2LLE \| pdb_00002lle	Download File View File

Computational design of an eight-stranded (beta/alpha)-barrel from fragments of different folds

Coles, M., Truffault, V., Eisenbeis, S., Proffitt, W., Meiler, J., Hocker, B.

(2012) J Am Chem Soc 134: 4019-4022

Released	2012-03-21
Method	SOLUTION NMR
Organisms	Thermotoga maritima
Macromolecule	Chemotaxis protein CheY, Imidazole glycerol phosphate synthase subunit HisF chimera (protein)

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2W6R \| pdb_00002w6r	Download File View File

Crystal structure of an artificial (ba)8-barrel protein designed from identical half barrels

Hocker, B., Lochner, A., Seitz, T., Claren, J., Sterner, R.

(2009) Biochemistry 48: 1145

Released	2009-02-03
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermotoga maritima
Macromolecule	IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF (protein)

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2W79 \| pdb_00002w79	Download File View File

Establishing wild-type levels of catalytic activity on natural and artificial (ba)8-barrel protein scaffolds

Claren, J., Malisi, C., Hocker, B., Sterner, R.

(2009) Proc Natl Acad Sci U S A 106: 3704

Released	2009-02-17
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Thermotoga maritima
Macromolecule	1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO) METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE (protein)
Unique Ligands	CL

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2WRZ \| pdb_00002wrz	Download File View File

Crystal structure of an arabinose binding protein with designed serotonin binding site in open, ligand-free state

Schreier, B., Stumpp, C., Wiesner, S., Hocker, B.

(2009) Proc Natl Acad Sci U S A 106: 18491

Released	2009-10-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli K-12
Macromolecule	L-ARABINOSE-BINDING PERIPLASMIC PROTEIN (protein)

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2XGZ \| pdb_00002xgz	Download File View File

Engineering the enolase active site pocket: Crystal structure of the S39N D321R mutant of yeast enolase 1

Schreier, B., Hocker, B.

(2010) Biochemistry 49: 7582

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ENOLASE 1 (protein)
Unique Ligands	MG, PEP

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2XH0 \| pdb_00002xh0	Download File View File

Engineering the enolase active site pocket: Crystal structure of the S39N Q167K D321R mutant of yeast enolase 1

Schreier, B., Hocker, B.

(2010) Biochemistry 49: 7582

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ENOLASE 1 (protein)
Unique Ligands	MG, PEP

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2XH2 \| pdb_00002xh2	Download File View File

Engineering the enolase active site pocket: Crystal structure of the S39N D321A mutant of yeast enolase 1

Schreier, B., Hocker, B.

(2010) Biochemistry 49: 7582

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ENOLASE 1 (protein)
Unique Ligands	2PG, MG

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2XH4 \| pdb_00002xh4	Download File View File

Engineering the enolase active site pocket: Crystal structure of the S39A D321A mutant of yeast enolase 1

Schreier, B., Hocker, B.

(2010) Biochemistry 49: 7582

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ENOLASE 1 (protein)
Unique Ligands	2PG, MG

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2XH7 \| pdb_00002xh7	Download File View File

Engineering the enolase active site pocket: Crystal structure of the D321A mutant of yeast enolase 1

Schreier, B., Hocker, B.

(2010) Biochemistry 49: 7582

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	ENOLASE 1 (protein)
Unique Ligands	2PG, MG

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3CWO \| pdb_00003cwo	Download File View File

A beta/alpha-barrel built by the combination of fragments from different folds

Bharat, T.A.M., Eisenbeis, S., Zeth, K., Hocker, B.

(2008) Proc Natl Acad Sci U S A 105: 9942-9947

Released	2008-07-08
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Thermotoga maritima
Macromolecule	beta/alpha-barrel protein based on 1THF and 1TMY (protein)
Unique Ligands	SO4

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4J5N \| pdb_00004j5n	Download File View File

Crystal Structure of a Deinococcus radiodurans PTE-like lactonase (drPLL) mutant Y28L/D71N/E101G/E179D/V235L/L270M

Meier, M.M., Rajendran, C., Malisi, C., Fox, N.G., Xu, C., Schlee, S., Barondeau, D.P., Hocker, B., Sterner, R., Raushel, F.M.

(2013) J Am Chem Soc 135: 11670-11677

Released	2013-07-24
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Deinococcus radiodurans
Macromolecule	Phosphotriesterase, putative (protein)
Unique Ligands	CO

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4Q37 \| pdb_00004q37	Download File View File

Crystal structure of the hypothetical protein TM0182 Thermotoga maritima, N-terminal domain.

Hocker, B., Farias-Rico, J.A.

(2014) Nat Chem Biol 10: 710-715

Released	2014-07-16
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Thermotoga maritima MSB8
Macromolecule	Radical SAM protein (protein)
Unique Ligands	PT

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5BVL \| pdb_00005bvl	Download File View File

Crystal structure of a de novo designed TIM-barrel

Feldmeier, K., Hocker, B.

(2016) Nat Chem Biol 12: 29-34

Released	2015-11-18
Method	X-RAY DIFFRACTION 1.992 Å
Organisms	synthetic construct
Macromolecule	designed TIM barrel sTIM11 (protein)

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5OWF \| pdb_00005owf	Download File View File

Structure of a LAO-binding protein mutant with glutamine

Shanmugaratnam, S., Banda-Vazquez, J., Sosa-Peinado, A., Hocker, B.

(2018) Protein Sci 27: 957-968

Released	2018-03-21
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	Lysine/arginine/ornithine-binding periplasmic protein (protein)
Unique Ligands	EDO, GLN, GOL, PEG