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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Brose, N."

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Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

	Loxosceles intermedia (4)
	Bothrops jararacussu (2)
	Bothrops brazili (1)
	Corynebacterium pseudotuberculosis (1)
	Homo sapiens (1)
	Moringa oleifera (1)
	Notechis scutatus scutatus (1)
	Schizosaccharomyces pombe 972h- (1)
	Staphylococcus aureus (1)
	Streptomyces lasalocidi (1)

Taxonomy

	Eukaryota (11)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (13)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (2)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (7)
	2015 - 2019 (5)
	2020 - 2024 (2)

Enzyme Classification Name

	Hydrolases (6)
	Lyases (4)
	Oxidoreductases (1)

Membrane Protein Annotation

	OPM (2)
	PDBTM (1)

Symmetry Type

	Asymmetric (8)
	Cyclic (5)
	Dihedral (1)

SCOP Classification

	All alpha proteins (2)
	All beta proteins (2)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 14 of 14 Structures

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2M7X \| pdb_00002m7x	Download File View File

Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2

Ullah, A., Kemp, G., Lee, B., Alves, C., Young, H., Sykes, B.D., Fliegel, L.

(2013) J Biological Chem 288: 24609-24624

Released	2013-06-05
Method	SOLUTION NMR
Organisms	Schizosaccharomyces pombe 972h-
Macromolecule	Na(+)/H(+) antiporter (protein)

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3RLG \| pdb_00003rlg	Download File View File

Crystal structure of Loxosceles intermedia phospholipase D isoform 1 H12A mutant

Giuseppe, P.O., Ullah, A., Veiga, S.S., Murakami, M.T., Arni, R.K.

(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67: 234-236

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Loxosceles intermedia
Macromolecule	Sphingomyelin phosphodiesterase D LiSicTox-alphaIA1a (protein)
Unique Ligands	EDO, MG, PEG, PGE

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3RLH \| pdb_00003rlh	Download File View File

Crystal structure of a class II phospholipase D from Loxosceles intermedia venom

Giuseppe, P.O., Ullah, A., Veiga, S.S., Murakami, M.T., Arni, R.K., Doherty, D.Z., Gismene, C., Bachega, J.F.R., Chahine, J., Gonzalez, J.E.H.

(2011) Biochem Biophys Res Commun 409: 622-627

Released	2011-06-29
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Loxosceles intermedia
Macromolecule	Dermonecrotic toxin LiSicTox-alphaIA1a (protein)
Unique Ligands	A1BTZ, EDO, MG, PEG, PGE

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4DCF \| pdb_00004dcf	Download File View File

Structure of MTX-II from Bothrops brazili

Ullah, A., Souza, T.A.C.B., Betzel, C., Murakami, M.T., Arni, R.K.

(2012) Int J Biol Macromol 51: 209-214

Released	2012-06-13
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Bothrops brazili
Macromolecule	MTX-II chain A (protein)
Unique Ligands	PG4

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4E0V \| pdb_00004e0v	Download File View File

Structure of L-amino acid oxidase from the B. jararacussu venom

Ullah, A., Souza, T.A.C.B., Betzel, C., Murakami, M.T., Arni, R.K.

(2012) Biochem Biophys Res Commun 421: 124-128

Released	2012-04-25
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Bothrops jararacussu
Macromolecule	L-amino-acid oxidase (protein)
Unique Ligands	FAD

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4E4C \| pdb_00004e4c	Download File View File

Crystal structure of Notexin at 1.8 A resolution

Ullah, A., Spencer, P., Murakami, M.T., Arni, R.K.

To be published

Released	2012-03-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Notechis scutatus scutatus
Macromolecule	Phospholipase A2 (protein)
Unique Ligands	MES, SO4

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4GSO \| pdb_00004gso	Download File View File

structure of Jararacussin-I

Ullah, A., Souza, T.C.A.B., Zanphorlin, L.M., Mariutti, R., Sanata, S.V., Murakami, M.T., Arni, R.K.

(2013) Protein Sci 22: 128-132

Released	2012-12-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bothrops jararacussu
Macromolecule	Thrombin-like enzyme BjussuSP-1 (protein)

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4RW3 \| pdb_00004rw3	Download File View File

Structural insights into substrate binding of brown spider venom class II phospholipases D

Coronado, M.A., Ullah, A., da Silva, L.S., Chaves-Moreira, D., Vuitika, L., Chaim, O.M., Veiga, S.S., Chahine, J., Murakami, M.T., Arni, R.K.

(2015) Curr Protein Pept Sci 16: 768-774

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Loxosceles intermedia
Macromolecule	Phospholipase D LiSicTox-alphaIA1bii (protein)
Unique Ligands	DKA, GOL, IPD, MG, OCA, PEG, PLM, SHV, TDA

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4RW5 \| pdb_00004rw5	Download File View File

Structural insights into substrate binding of brown spider venom class II phospholipases D

Coronado, M.A., Ullah, A., da Silva, L.S., Chaves-Moreira, D., Vuitika, L., Chaim, O.M., Veiga, S.S., Chahine, J., Murakami, M.T., Arni, R.K.

(2015) Curr Protein Pept Sci 16: 768-774

Released	2015-06-03
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Loxosceles intermedia
Macromolecule	Phospholipase D LiSicTox-alphaIA1bii (protein)
Unique Ligands	GOL, MG, OCA, PLM, TDA

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5C2Z \| pdb_00005c2z	Download File View File

Molecular insights into the specificity of exfoliative toxins from Staphylococcus aureus

Mariutti, R.B., Souza, T.A.C.B., Ullah, A., Zanphorlin, L.M., Murakami, M.T., Arni, R.K.

(2015) Biochem Biophys Res Commun 467: 171-177

Released	2016-04-27
Method	X-RAY DIFFRACTION 1.9553 Å
Organisms	Staphylococcus aureus
Macromolecule	Exfoliative toxin D2 (protein)

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5DOM \| pdb_00005dom	Download File View File

Crystal structure, maturation and flocculating properties of a 2S albumin from Moringa oleifera seeds

Ullah, A., Murakami, M.T., Arni, R.K.

(2015) Biochem Biophys Res Commun 468: 365-371

Released	2015-11-11
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Moringa oleifera
Macromolecule	2S albumin (protein)
Unique Ligands	ACT, EDO

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5JVO \| pdb_00005jvo	Download File View File

Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis

Mariutti, R.B., Ullah, A., Murakami, M.T., Arni, R.K.

(2016) Biochem Biophys Res Commun 475: 350-355

Released	2016-08-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Corynebacterium pseudotuberculosis
Macromolecule	Arginine repressor (protein)
Unique Ligands	SO4, TYR

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7SH1 \| pdb_00007sh1	Download File View File

Class II UvrA protein - Ecm16

Grade, P., Erlandson, A., Ullah, A., Mathews, I.I., Chen, X., Kim, C.-Y., Mera, P.E.

(2023) Sci Rep 13: 7980-7980

Released	2022-10-26
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Streptomyces lasalocidi
Macromolecule	Excinuclease ABC subunit UvrA (protein)
Unique Ligands	ADP, CL, MG, ZN

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7T91 \| pdb_00007t91	Download File View File

Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region

Wu, M., Zhang, S., Augelli-Szanfran, C.E., Boohaker, R.J.

(2024) Int J Mol Sci 25:

Released	2022-12-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Homo sapiens
Macromolecule	Isoform 2 of Zinc finger protein GLI1 (protein)
Unique Ligands	ZN

1 to 14 of 14 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2M7X | pdb_00002m7x

Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2

3RLG | pdb_00003rlg

Crystal structure of Loxosceles intermedia phospholipase D isoform 1 H12A mutant

3RLH | pdb_00003rlh

Crystal structure of a class II phospholipase D from Loxosceles intermedia venom

4DCF | pdb_00004dcf

Structure of MTX-II from Bothrops brazili

4E0V | pdb_00004e0v

Structure of L-amino acid oxidase from the B. jararacussu venom

4E4C | pdb_00004e4c

Crystal structure of Notexin at 1.8 A resolution

4GSO | pdb_00004gso

structure of Jararacussin-I

4RW3 | pdb_00004rw3

Structural insights into substrate binding of brown spider venom class II phospholipases D

4RW5 | pdb_00004rw5

Structural insights into substrate binding of brown spider venom class II phospholipases D

5C2Z | pdb_00005c2z

Molecular insights into the specificity of exfoliative toxins from Staphylococcus aureus

5DOM | pdb_00005dom

Crystal structure, maturation and flocculating properties of a 2S albumin from Moringa oleifera seeds

5JVO | pdb_00005jvo

Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis

7SH1 | pdb_00007sh1

Class II UvrA protein - Ecm16

7T91 | pdb_00007t91

Crystal structure of Zinc finger motif 1 and 2 of GLI1 DNA binding region

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2M7X | pdb_00002m7x

3RLG | pdb_00003rlg

3RLH | pdb_00003rlh

4DCF | pdb_00004dcf

4E0V | pdb_00004e0v

4E4C | pdb_00004e4c

4GSO | pdb_00004gso

4RW3 | pdb_00004rw3

4RW5 | pdb_00004rw5

5C2Z | pdb_00005c2z

5DOM | pdb_00005dom

5JVO | pdb_00005jvo

7SH1 | pdb_00007sh1

7T91 | pdb_00007t91