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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Grishkovskaya, I."

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Homo sapiens (25)
	Escherichia coli (4)
	Danio rerio (3)
	Saccharomyces cerevisiae S288C (3)
	Spinacia oleracea (2)
	Toxoplasma gondii VEG (2)
	Trypanosoma brucei (2)
	Arabidopsis thaliana (1)
	Bacillus subtilis (1)
	Bacillus subtilis subsp. subtilis str. 168 (1)

More...

Taxonomy

	Eukaryota (41)
	Bacteria (8)
	Archaea (1)
	Riboviria (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (37)
	ELECTRON MICROSCOPY (15)

Polymer Entity Type

	Protein (52)
	RNA (5)
	DNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (15)
	2.0 - 2.5 (11)
	2.5 - 3.0 (8)
	3.0 - 3.5 (9)
	3.5 - 4.0 (3)
	4.0 - 4.5 (3)

Release Date

	2000 - 2004 (9)
	2005 - 2009 (1)
	2010 - 2014 (10)
	2015 - 2019 (4)
	2020 - 2024 (28)

Enzyme Classification Name

	Hydrolases (16)
	Transferases (11)
	Translocases (1)
	Lyases (4)
	Oxidoreductases (1)

Membrane Protein Annotation

	mpstruc (2)
	MemProtMD (1)
	PDBTM (1)

Symmetry Type

	Asymmetric (26)
	Cyclic (26)

SCOP Classification

	All beta proteins (12)
	Artifacts (4)
	Alpha and beta proteins (a+b) (4)
	All alpha proteins (2)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 25 of 52 Structures

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1D2S \| pdb_00001d2s	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LAMININ G-LIKE DOMAIN OF SHBG IN COMPLEX WITH DIHYDROTESTOSTERONE

Grishkovskaya, I., Avvakumov, G.V., Sklenar, G., Dales, D., Hammond, G.L., Muller, Y.A.

(2000) EMBO J 19: 504-512

Released	2000-06-28
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	CA, DHT

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1F5F \| pdb_00001f5f	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL G-DOMAIN OF SHBG IN COMPLEX WITH ZINC

Avvakumov, V.A., Muller, Y.A., Hammond, G.L.

(2000) J Biological Chem 275: 25920-25925

Released	2000-09-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	CA, DHT, IPA, ZN

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1KDK \| pdb_00001kdk	Download File View File

THE STRUCTURE OF THE N-TERMINAL LG DOMAIN OF SHBG IN CRYSTALS SOAKED WITH EDTA

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Muller, Y.A.

(2002) J Mol Biology 318: 621-626

Released	2002-05-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Sex Hormone-Binding Globulin (protein)
Unique Ligands	DHT

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1KDM \| pdb_00001kdm	Download File View File

THE CRYSTAL STRUCTURE OF THE HUMAN SEX HORMONE-BINDING GLOBULIN (TETRAGONAL CRYSTAL FORM)

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Muller, Y.A.

(2002) J Mol Biology 318: 621-626

Released	2002-05-15
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	sex hormone-binding globulin (protein)
Unique Ligands	CA, DHT

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1LHN \| pdb_00001lhn	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH 5ALPHA-ANDROSTANE-3BETA,17ALPHA-DIOL

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Catalano, M.G., Muller, Y.A.

(2002) J Biological Chem 277: 32086-32093

Released	2002-10-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	AON, CA, ZN

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1LHO \| pdb_00001lho	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH 5ALPHA-ANDROSTANE-3BETA,17BETA-DIOL

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Catalano, M.G., Muller, Y.A.

(2002) J Biological Chem 277: 32086-32093

Released	2002-10-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	AOM, CA

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1LHU \| pdb_00001lhu	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH ESTRADIOL

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Catalano, M.G., Muller, Y.A.

(2002) J Biological Chem 277: 32086-32093

Released	2002-10-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	CA, EST

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1LHV \| pdb_00001lhv	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH NORGESTREL

Grishkovskaya, I., Avvakumov, G.V., Hammond, G.L., Catalano, M.G., Muller, Y.A.

(2002) J Biological Chem 277: 32086-32093

Released	2002-10-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	CA, IPA, NOG, ZN

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1LHW \| pdb_00001lhw	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL LG-DOMAIN OF SHBG IN COMPLEX WITH 2-METHOXYESTRADIOL

Avvakumov, G.V., Grishkovskaya, I., Muller, Y.A., Hammond, G.L.

(2002) J Biological Chem 277: 45219-45225

Released	2002-10-23
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	SEX HORMONE-BINDING GLOBULIN (protein)
Unique Ligands	CA, ESM, IPA

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2HQS \| pdb_00002hqs	Download File View File

Crystal structure of TolB/Pal complex

Grishkovskaya, I., Bonsor, D.A., Kleanthous, C., Dodson, E.J.

(2007) J Am Chem Soc 129: 4800-4807

Released	2007-04-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	Peptidoglycan-associated lipoprotein (protein) Protein tolB (protein)
Unique Ligands	ACT, GOL, SO4

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3NTL \| pdb_00003ntl	Download File View File

Crystal Structure of Glucose-1-phosphatase (AgpE) from Enterobacter cloacae

Grishkovskaya, I., Hoehne, W.

To be published

Released	2011-07-27
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Enterobacter cloacae
Macromolecule	Acid glucose-1-phosphate phosphatase (protein)
Unique Ligands	CA, IHP, PO4

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3O0E \| pdb_00003o0e	Download File View File

Crystal structure of OmpF in complex with colicin peptide OBS1

Wojdyla, J.A., Housden, N.G., Korczynska, J., Grishkovskaya, I., Kirkpatrick, N., Brzozowski, A.M., Kleanthous, C.

(2010) Proc Natl Acad Sci U S A 107: 21412-21417

Released	2010-12-08
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Escherichia coli
Macromolecule	Colicin-E9 (protein) Porin OmpF (protein)
Unique Ligands	BOG

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3T90 \| pdb_00003t90	Download File View File

Crystal structure of glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana

Grishkovskaya, I., Herter, T., Riegler, H., Usadel, B.

(2012) Biochem J 443: 427-437

Released	2012-04-11
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Arabidopsis thaliana
Macromolecule	Glucose-6-phosphate acetyltransferase 1 (protein)
Unique Ligands	EPE, NA

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4JG3 \| pdb_00004jg3	Download File View File

Crystal structure of catabolite repression control protein (crc) from Pseudomonas aeruginosa

Grishkovskaya, I., Milojevic, T., Sonnleitner, E., Blaesi, U., Djinovic-Carugo, K.

(2013) PLoS One 8: e64609-e64609

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Catabolite repression control protein (protein)
Unique Ligands	CL

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4LQK \| pdb_00004lqk	Download File View File

Structure of the vaccinia virus NF- B antagonist A46

Grishkovskaya, I., Fedosyuk, S., Skern, T., Djinovic-Carugo, K.

(2014) J Biological Chem 289: 3749-3762

Released	2013-12-25
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Vaccinia virus WR
Macromolecule	Protein A46 (protein)
Unique Ligands	BR, NA

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4Q57 \| pdb_00004q57	Download File View File

Crystal structure of the plectin 1a actin-binding domain/N-terminal domain of calmodulin complex

Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

To be published

Released	2014-07-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Calmodulin (protein) Plectin (protein)
Unique Ligands	CA, CL, EDO, GOL, MG

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4Q58 \| pdb_00004q58	Download File View File

Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex

Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

To be published

Released	2014-07-23
Method	X-RAY DIFFRACTION 4.001 Å
Organisms	Homo sapiens
Macromolecule	Integrin beta-4 (protein) Plectin (protein)

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4Q59 \| pdb_00004q59	Download File View File

Crystal structure of plectin 1a actin-binding domain

Song, J.-G., Kostan, J., Grishkovskaya, I., Djinovic-Carugo, K.

To be published

Released	2014-07-23
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Plectin (protein)

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4QBB \| pdb_00004qbb	Download File View File

Structure of the foot-and-mouth disease virus leader proteinase in complex with inhibitor (N~2~-[(3S)-4-({(2R)-1-[(4-CARBAMIMIDAMIDOBUTYL)AMINO]-4-METHYL-1-OXOPENTAN-2-YL}AMINO)-3-HYDROXY-4-OXOBUTANOYL]-L-ARGINYL-L-PROLINAMIDE)

Grishkovskaya, I., Steinberger, J., Cencic, R., Juliano, M.A., Juliano, L., Skern, T.

(2014) Virology 468-470C: 397-408

Released	2014-11-05
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Foot-and-mouth disease virus (strain O1)
Macromolecule	Leader protease (protein)
Unique Ligands	E69, K, PO4

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4TOI \| pdb_00004toi	Download File View File

Crystal structure of E.coli ribosomal protein S2 in complex with N-terminal domain of S1

Grishkovskaya, I., Byrgazov, K., Moll, I., Djinovic-Carugo, K.

(2015) Nucleic Acids Res 43: 661-673

Released	2014-12-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli Escherichia coli TA206
Macromolecule	30S ribosomal protein S2,Ribosomal protein S1 (protein)
Unique Ligands	ZN

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4XQ3 \| pdb_00004xq3	Download File View File

Crystal structure of Sso-SmAP2

Bezerra, G.A., Martens, B., Kreuter, M.J., Grishkovskaya, I., Manica, M., Arkhipova, V., Blasi, U., Djinovic-Carugo, K.

(2015) Life (Basel) 5: 1264-1281

Released	2015-04-29
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Saccharolobus solfataricus 98/2
Macromolecule	Like-Sm ribonucleoprotein core (protein)

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4YDP \| pdb_00004ydp	Download File View File

Crystal structure of N-terminal PDZ domain of ZASP in complex with myotilin C-terminal peptide.

Grishkovskaya, I., Onipe, A., Kontaxis, G., Djinovic-Carugo, K.

To be published

Released	2016-06-29
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	LIM domain-binding protein 3 (protein)
Unique Ligands	GLU, LEU

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5MAV \| pdb_00005mav	Download File View File

Crystal structure of human PCNA in complex with PARG (poly(ADP-ribose) glycohydrolase) peptide.

Grishkovskaya, I., Djinovic-Carugo, K., Slade, D.

(2017) Nucleic Acids Res 45: 9741-9759

Released	2017-08-02
Method	X-RAY DIFFRACTION 2.575 Å
Organisms	Homo sapiens
Macromolecule	Poly (ADP-ribose) glycohydrolase (protein) Proliferating cell nuclear antigen (protein)

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5MFA \| pdb_00005mfa	Download File View File

Crystal structure of human promyeloperoxidase (proMPO)

Grishkovskaya, I., Furtmueller, P.G., Obinger, C., Djinovic-Carugo, K.

(2017) J Biological Chem 292: 8244-8261

Released	2017-04-05
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Myeloperoxidase (protein)
Unique Ligands	CA, CL, HEM, NAG, PEG, TRS
Unique branched monosaccharides	BMA, MAN, NAG

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6IC8 \| pdb_00006ic8	Download File View File

Crystal structure of the SPOC domain of human PHF3 in complex with RNA polymerase II CTD diheptapeptide phosphorylated on Ser2

Grishkovskaya, I., Djinovic-Carugo, K., Slade, D.

(2021) Nat Commun 12: 6078

Released	2020-07-15
Method	X-RAY DIFFRACTION 1.929 Å
Organisms	Homo sapiens
Macromolecule	PHD finger protein 3 (protein) TYR-SEP-PRO-THR-SER-PRO-SER-TYR-SEP-PRO-THR (protein)

1 to 25 of 52 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1D2S | pdb_00001d2s

1F5F | pdb_00001f5f

1KDK | pdb_00001kdk

1KDM | pdb_00001kdm

1LHN | pdb_00001lhn

1LHO | pdb_00001lho

1LHU | pdb_00001lhu

1LHV | pdb_00001lhv

1LHW | pdb_00001lhw

2HQS | pdb_00002hqs

3NTL | pdb_00003ntl

3O0E | pdb_00003o0e

3T90 | pdb_00003t90

4JG3 | pdb_00004jg3

4LQK | pdb_00004lqk

4Q57 | pdb_00004q57

4Q58 | pdb_00004q58

4Q59 | pdb_00004q59

4QBB | pdb_00004qbb

4TOI | pdb_00004toi

4XQ3 | pdb_00004xq3

4YDP | pdb_00004ydp

5MAV | pdb_00005mav

5MFA | pdb_00005mfa

6IC8 | pdb_00006ic8