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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Bothrops jararacussu"

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This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

Bothrops jararacussu (23)

Taxonomy

Eukaryota (23)

Experimental Method

X-RAY DIFFRACTION (23)

Polymer Entity Type

Protein (23)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (1)
	1.5 - 2.0 (12)
	2.0 - 2.5 (6)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (8)
	2010 - 2014 (7)
	2015 - 2019 (3)
	2020 - 2024 (3)

Enzyme Classification Name

	Hydrolases (11)
	Oxidoreductases (1)

Membrane Protein Annotation

OPM (4)

Symmetry Type

	Cyclic (18)
	Asymmetric (7)
	Dihedral (1)

SCOP Classification

	All alpha proteins (17)
	Alpha and beta proteins (a+b) (1)
	All beta proteins (1)

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1 to 23 of 23 Structures

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1U73 \| pdb_00001u73	Download File View File

Crystal structure of a Dimeric Acidic Platelet Aggregation Inhibitor and Hypotensive Phospholipase A2 from Bothrops jararacussu

Magro, A.J., Murakami, M.T., Soares, A.M., Arni, R.K., Fontes, M.R.

(2004) Biochem Biophys Res Commun 323: 24-31

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bothrops jararacussu
Macromolecule	hypotensive phospholipase A2 (protein)

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1UMV \| pdb_00001umv	Download File View File

Crystal structure of an acidic, non-myotoxic phospholipase A2 from the venom of Bothrops jararacussu

Murakami, M.T., Watanabe, L., Cintra, A.C.O., Arni, R.K.

(2004) Biochem Biophys Res Commun 323: 24

Released	2003-09-18
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Bothrops jararacussu
Macromolecule	HYPOTENSIVE PHOSPHOLIPASE A2 (protein)
Unique Ligands	CA

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1Z76 \| pdb_00001z76	Download File View File

Crystal structure of an acidic phospholipase A2 (BthA-I) from Bothrops jararacussu venom complexed with p-bromophenacyl bromide

Magro, A.J., Takeda, A.A., Soares, A.M., Fontes, M.R.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1670-1677

Released	2006-03-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Bothrops jararacussu
Macromolecule	phospholipase A2 (protein)
Unique Ligands	PBP

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1ZL7 \| pdb_00001zl7	Download File View File

Crystal structure of catalytically-active phospholipase A2 with bound calcium

Murakami, M.T., Cintra, A.C., Gabdoulkhakov, A., Genov, N., Betzel, C., Arni, R.K.

(2006) Biochimie 88: 543-549

Released	2006-04-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bothrops jararacussu
Macromolecule	hypotensive phospholipase A2 (protein)
Unique Ligands	CA, GOL

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1ZLB \| pdb_00001zlb	Download File View File

Crystal structure of catalytically-active phospholipase A2 in the absence of calcium

Murakami, M.T., Cintra, A.C., Gabdoulkhakov, A., Genov, N., Betzel, C., Arni, R.K.

(2006) Biochimie 88: 543-549

Released	2006-04-25
Method	X-RAY DIFFRACTION 0.97 Å
Organisms	Bothrops jararacussu
Macromolecule	hypotensive phospholipase A2 (protein)

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2H8I \| pdb_00002h8i	Download File View File

Crystal Structure of the Bothropstoxin-I complexed with polyethylene glycol

Murakami, M.T., Arni, R.K.

(2007) Toxicon 49: 378-387

Released	2007-06-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog 1 (protein)
Unique Ligands	PEG

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2OQD \| pdb_00002oqd	Download File View File

Crystal Structure of BthTX-II

Correa, L.C., Marchi-Salvador, D.P., Cintra, A.C.O., Soares, A.M., Fontes, M.R.M.

(2008) Biochim Biophys Acta 1784: 591-599

Released	2008-02-12
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 (protein)

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3CXI \| pdb_00003cxi	Download File View File

Structure of BthTX-I complexed with alpha-tocopherol

dos Santos, J.I., Fontes, M.R.M.

(2009) J Struct Biol 167: 106-116

Released	2009-05-05
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Bothrops jararacussu
Macromolecule	Myotoxic phospholipase A2-like (protein)
Unique Ligands	PE4, SO4, VIT

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3HZD \| pdb_00003hzd	Download File View File

Crystal structure of bothropstoxin-I (BthTX-I), a PLA2 homologue from Bothrops jararacussu venom

Silva, M.C.O., Marchi-Salvador, D.P., Fernandes, C.A.H., Soares, A.M., Fontes, M.R.M.

(2010) J Struct Biol 171: 31-43

Released	2009-07-07
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	LI

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3HZW \| pdb_00003hzw	Download File View File

Crystal structure of bothropstoxin-I chemically modified by p-bromophenacyl bromide (BPB)

Fernandes, C.A.H., Marchi-Salvador, D.P., Soares, A.M., Fontes, M.R.M.

(2010) J Struct Biol 171: 31-43

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	IPA, PBP

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3I03 \| pdb_00003i03	Download File View File

Crystal structure of bothropstoxin-I chemically modified by p-bromophenacyl bromide (BPB) - monomeric form at a high resolution

Marchi-Salvador, D.P., Fernandes, C.A.H., Soares, A.M., Fontes, M.R.M.

(2010) J Struct Biol 171: 31-43

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	IPA, PBP

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3I3H \| pdb_00003i3h	Download File View File

Crystal structure of Bothropstoxin-I crystallized at 291K

Salvador, G.H.M., Marchi-Salvador, D.P., Soares, A.M., Fontes, M.R.M.

To be published

Released	2010-08-11
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)

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3I3I \| pdb_00003i3i	Download File View File

Crystal Structure of Bothropstoxin-I crystallized at 283 K

Salvador, G.H.M., Marchi-Salvador, D.P., Soares, A.M., Fontes, M.R.M.

(2010) J Struct Biol 171: 31-43

Released	2010-04-28
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)

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3IQ3 \| pdb_00003iq3	Download File View File

Crystal Structure of Bothropstoxin-I complexed with polietilene glicol 4000 - crystallized at 283 K

Salvador, G.H.M., Marchi-Salvador, D.P., Silva, M.C.O., Soares, A.M., Fontes, M.R.M.

(2010) J Struct Biol 171: 31-43

Released	2009-10-27
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	PE4, SO4

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3JR8 \| pdb_00003jr8	Download File View File

Crystal Structure of BthTX-II (Asp49-PLA2 from Bothrops jararacussu snake venom) with calcium ions

Borges, R.J., dos Santos, J.I., Fontes, M.R.M.

(2011) Proteins 79: 61-78

Released	2010-09-08
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bothrops jararacussu
Macromolecule	Phospholipase A2 bothropstoxin-2 (protein)
Unique Ligands	CA

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4E0V \| pdb_00004e0v	Download File View File

Structure of L-amino acid oxidase from the B. jararacussu venom

Ullah, A., Souza, T.A.C.B., Betzel, C., Murakami, M.T., Arni, R.K.

(2012) Biochem Biophys Res Commun 421: 124-128

Released	2012-04-25
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Bothrops jararacussu
Macromolecule	L-amino-acid oxidase (protein)
Unique Ligands	FAD

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4GSO \| pdb_00004gso	Download File View File

structure of Jararacussin-I

Ullah, A., Souza, T.C.A.B., Zanphorlin, L.M., Mariutti, R., Sanata, S.V., Murakami, M.T., Arni, R.K.

(2013) Protein Sci 22: 128-132

Released	2012-12-12
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Bothrops jararacussu
Macromolecule	Thrombin-like enzyme BjussuSP-1 (protein)

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4WTB \| pdb_00004wtb	Download File View File

BthTX-I, a svPLA2s-like toxin, complexed with zinc ions

Borges, R.J., Fontes, M.R.M.

(2017) Biochim Biophys Acta 1861: 3199-3209

Released	2015-11-11
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Bothrops jararacussu
Macromolecule	Basic phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	CL, SO4, ZN

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5F2Q \| pdb_00005f2q	Download File View File

C-type lectin from Bothrops jararacussu

de Padua, R.A.P., Pinheiro, M.P., Sartim, M.A., Sampaio, S.V., Nonato, M.C.

To be published

Released	2016-12-07
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Bothrops jararacussu
Macromolecule	C-type lectin BJcuL (protein)
Unique Ligands	CA, NA

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6DIK \| pdb_00006dik	Download File View File

Crystal structure of Bothropstoxin I (BthTX-I) complexed to Chicoric acid

Cardoso, F.F., Salvador, G.H.M., Borges, R.J.

(2018) Biochim Biophys Acta Gen Subj 1862: 2728-2737

Released	2018-10-03
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Bothrops jararacussu
Macromolecule	Basic phospholipase A2 homolog bothropstoxin-1 (protein)
Unique Ligands	BCT, EOH, GKP, SO4

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7RJI \| pdb_00007rji	Download File View File

BthTX-II variant b, from Bothrops jararacussu venom, complexed with stearic acid

Borges, R.J., Fontes, M.R.M.

(2021) Int J Biol Macromol 191: 255-266

Released	2022-01-05
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Bothrops jararacussu
Macromolecule	BthTX-IIb (protein)
Unique Ligands	NA, SO4, STE

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7RJZ \| pdb_00007rjz	Download File View File

BthTX-II variant a, from Bothrops jararacussu venom, complexed with benzoic acid

Borges, R.J., Fontes, M.R.M.

(2021) Int J Biol Macromol 191: 255-266

Released	2022-01-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bothrops jararacussu
Macromolecule	BthTX-IIa (protein)
Unique Ligands	BEZ

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7ROX \| pdb_00007rox	Download File View File

BthTX-I complexed with inhibitor MMV

Borges, R.J., De Marino, I., Uson, I., Fontes, M.R.M.

(2023) Biochimie 206: 105-115

Released	2022-11-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bothrops jararacussu
Macromolecule	Basic phospholipase A2 homolog bothropstoxin-I (protein)
Unique Ligands	85O

1 to 23 of 23 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1U73 | pdb_00001u73

1UMV | pdb_00001umv

1Z76 | pdb_00001z76

1ZL7 | pdb_00001zl7

1ZLB | pdb_00001zlb

2H8I | pdb_00002h8i

2OQD | pdb_00002oqd

3CXI | pdb_00003cxi

3HZD | pdb_00003hzd

3HZW | pdb_00003hzw

3I03 | pdb_00003i03

3I3H | pdb_00003i3h

3I3I | pdb_00003i3i

3IQ3 | pdb_00003iq3

3JR8 | pdb_00003jr8

4E0V | pdb_00004e0v

4GSO | pdb_00004gso

4WTB | pdb_00004wtb

5F2Q | pdb_00005f2q

6DIK | pdb_00006dik

7RJI | pdb_00007rji

7RJZ | pdb_00007rjz

7ROX | pdb_00007rox